Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1595 ATGCGTCGGATCCTTCCGGCGCACGCTAAGATCTCCGATGAAGCTAAAGAGACGGTCCAGGAGTGCGTCTCTGAGTATATCAGCTTCATTACGAGCGAGGCGAACCAGCGGTGCCGTCAGGAGCAGCGCAAGACGGTAACGGCCGATGACTTGCTATGGGCCATGGAGAAGCTGGGCTTTGACAACTACGTGGGGCCTCTCTCTCTTTATCTGCACCGTTACCGTAATGGTGAGGGGAGTTCCGGTGGCCACTATGTCCCACGGGTACAGCCGCCACAAGTGCTGGCTCCCCCAGAGCTCGCACCAGCAATGCCACCACTTCCGCCGCCATCGTACTATTACGGGTCGGGTTATAATTATCCAGTGGCGACGAATCAGATGGGGCCGTCGGGTGCTGGTAGCTCAAGCAGTGGTGGCAGTGGTGGTGGTGCTCCGGCTTATTATGATCCGTATGCTCATCTGAGGAATGACCGTTTCTGA 480 0.5708 MRRILPAHAKISDEAKETVQECVSEYISFITSEANQRCRQEQRKTVTADDLLWAMEKLGFDNYVGPLSLYLHRYRNGEGSSGGHYVPRVQPPQVLAPPELAPAMPPLPPPSYYYGSGYNYPVATNQMGPSGAGSSSSGGSGGGAPAYYDPYAHLRNDRF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1595 159 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
Lele02g1595 159 Gene3D Histone, subunit A 1 83 IPR009072 GO:0046982
Lele02g1595 159 SUPERFAMILY Histone-fold 1 83 IPR009072 GO:0046982
Lele02g1595 159 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 82 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele02g1595 159 MobiDBLite consensus disorder prediction 129 149 - -
Lele02g1595 159 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Lele02g1595 159 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Lele02g1595 159 PRINTS CCAAT-binding transcription factor subunit A signature 19 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1595 Lele-ChrLele02 19831742 19832221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1595 1 82 CCAAT-HAP3 Transcription Factor Family AT5G47670 76.829 1.64e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele02g1595 CBFD_NFYB_HMF 1.2e-18 CL0012