Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1578 ATGAAAAAATTTTTGGTCATGGAAATCAGAAGAGAGGATGATGAAGGTGATTCTCAGGAGGTTTCTCTGCAGAATATTGCAGCAGCACGCAATGGCTTTGGTCACAGCATAGAGTTGATGTCTCAGCCCAATTACCTTTCCAATAATAATAACAACAACAGGTTCTCTGATATTGATATTGTTATTGACCATTCCTCTCTAAACCGTGATCGCCCTGTCCCCATATTTCTCAAGTTTGAGGATGTAGAGTACAAGGTGAGGAACAGCCATGCAGTGTCCAAGCTGAGGAAAACGGTGTCAAAGGTGGCCACACAAGTCAGTGAAAGCCAAGACAGATACAAGAAAATCTTGAAGGGTATAACTGGAAGTATAGGTCCTGGTGAGATCCTGGCTCTCATGGGTCCTTCTGGTAGTGGCAAGACAACCTTGTTGAAAGTCATAGGAGGAAGATTATCTGACAATGTCAAAGGAAAAGTTACTTACAATGACGTTGGATACAGTTCTGCTATCAAGACAAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCACAACTAACAGTGGAAGAAACATTAGTCTTCTCTGCATTCTTAAGGTTGCCATCCAACATGAGCCGAGAACAAAAACATCAGAGAGTGGAGGCAACTCTACAGGATCTAGGACTTGAAAGATGTCGGCATACAAAAATAGGAGGAGGATTCATTAAAGGCATATCGGGAGGGGAAAGGAAGAGAACCAGCATAGGGCATGAGATTCTTGTGGATCCGTCGCTGCTTCTACTTGATGAGCCAACTTCAGGCCTTGATTCCTCTTCAGCAAACAGGCTCCTTCTCACTCTTCATGGACTTGCCAAGTCTGGAAGGACAATAATCACAACAATTCATCAGCCATCCAGCAGGATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTACCCAATATATTATGGGAAGGCTAGAGATTCAATGGACTATTTCTCATCATTGAGGTTCATCCCAGACATACCCATGAATCCTGCAGAGTTCTTGCTTGACTTGGCCACTGGACAAGTGAATGACATCAGCATTCCAGAAGACGTTTTTGAACATCAAGAATCCGCTGACACTCCTAAAGCTGTCATAAAACATCTACAACTTAAGTACAAGAGTTTACTGGAGCCAAAGGAAAAAGAAGACAACCATGGAGTAATGAAGGCACCAGAACATCTACAAGTTGCTATTCAAGCTAAGAAGGAGTGGACATTGAGTTGGATAGACCAGTTCATGGTTCTGTCAAAGAGAACATTCATAGCAAGATCCAAAGACTACTTTGATAAGGTCAGACTAATTCAGGCAGTTGGAGTTGCACTCTTGCTTGGCCTTCTTTGGTGGAAATCTTCAACCCACACAGAGGCTCAACTCAGAGATCAGGTGGGGTTAATGTTCTATATCTGTATATTCTGGACGTCCTCATGTATCTTTGGAGCAGTGTATGTGTTCCCATTTGAGAAGATATATTTGGTGAAAGAAAGGAAAGCGGACATGTACAGATTAAGCGTATACTACGCATGCAGCACTCTGTGTGATATGATAGCTCATGTGTTCTACCCTACTTTTTTTATGCTTATCTTGTACTTCATGGCTGGCTTCAAGAGAACCCTCACTGCCTTCTCTATCACACTACTCTCTGTGCTTCTCATAGCCATTACCAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAATTATGAGTATTCAAAGAGCTGGCATGATTGCTTCTTTGATCCTAATGCTATTCCTGCTAACTGGTGGCTACTATGTCCAGCACATACCAGTATTCATGAGGTGGTTGAAGTATTTGTCGTTCATGTTCTATGGGTTCAGGCTTCTGCTAAAAGTGCAGTACTCAGGAGATGAACTGTATGAGTGTGAAAGCGTTGGAGGGTGCAGGACTCTGCAGAGCTCTCCTTCATTCGACACTGTGAACTTGGAAGGAGGTTTGAAAGAAGTTTGGGTTCTTCTTGCCATGGCTCTCATCTTTCGTCTCTTTGCTTACTTGTGCCTCCGCATCAGAATTGATTCCTCCAACCTCTGA 2085 0.4293 MKKFLVMEIRREDDEGDSQEVSLQNIAAARNGFGHSIELMSQPNYLSNNNNNNRFSDIDIVIDHSSLNRDRPVPIFLKFEDVEYKVRNSHAVSKLRKTVSKVATQVSESQDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLSDNVKGKVTYNDVGYSSAIKTRIGFVTQDDVLFPQLTVEETLVFSAFLRLPSNMSREQKHQRVEATLQDLGLERCRHTKIGGGFIKGISGGERKRTSIGHEILVDPSLLLLDEPTSGLDSSSANRLLLTLHGLAKSGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKARDSMDYFSSLRFIPDIPMNPAEFLLDLATGQVNDISIPEDVFEHQESADTPKAVIKHLQLKYKSLLEPKEKEDNHGVMKAPEHLQVAIQAKKEWTLSWIDQFMVLSKRTFIARSKDYFDKVRLIQAVGVALLLGLLWWKSSTHTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKIYLVKERKADMYRLSVYYACSTLCDMIAHVFYPTFFMLILYFMAGFKRTLTAFSITLLSVLLIAITSQGAGELFGAAIMSIQRAGMIASLILMLFLLTGGYYVQHIPVFMRWLKYLSFMFYGFRLLLKVQYSGDELYECESVGGCRTLQSSPSFDTVNLEGGLKEVWVLLAMALIFRLFAYLCLRIRIDSSNL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1578 694 SMART AAA_5 126 317 IPR003593 -
Lele02g1578 694 FunFam ABC transporter G family member 22 104 333 - -
Lele02g1578 694 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 56 682 - -
Lele02g1578 694 Pfam ABC-2 type transporter 424 632 IPR013525 GO:0016020|GO:0140359
Lele02g1578 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 332 IPR027417 -
Lele02g1578 694 CDD ABCG_EPDR 113 321 - -
Lele02g1578 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 339 IPR003439 GO:0005524
Lele02g1578 694 Pfam ABC transporter 117 267 IPR003439 GO:0005524
Lele02g1578 694 Gene3D - 98 333 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1578 Lele-ChrLele02 19715024 19719481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1578 115 300 Calmodulin-binding Proteins AT2G36910 29.843 8.42e-11 63.5