Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1575 ATGAATAATTCAGCAGAAGCAGAAGATCAAACAGCTGGAACTGTCAGAACCAGGTCTGCTTCTGATTCCTTCATGATTGAGATGGTAATGACGATTTACAGAGCCAGATGGTTTGTGTTCTTGAGGAGAGTGTTCCAGTACCAAAACGGGTCGAGATCGGATATTGGGTCCAACCCATTTAACTCGACCCCGTGGATGATAACGGAGTTGGTGGCTTTGCTGGTGCAGATAACGGCGTCGTCGACAACTCTGGCGATTTCGCAGGAGGAGAGACCAGTTTGGCCGATGAGGTTCTGGATTTTAGGATATGAAATAGGCTGTGTTCTTAGTTTATTGCTTCTGTATGGGCGATATCGTCTTCTTCATTTGGATCAATCACATGTTCTTCTTACCGTCTCTGATGACTTGGAACAGCAGAGAGGAAGAGAAGAGGAGGGAAAAACCAGGATGTGTGAGCTGATGAACAAGTGCAGGAGTTCAGTGGAATTGATATTTGGAATGTGGTTTGTGATGGGCAACGTGTGGGTGTTTGGGTGTGGTTATGGATCAATTCATAGAGCTCCAAAGCTTCATATGCTCTGCATCTCTCTTCTTGCTTGGAATGCCATCTCTTACTCATTCCCTTTCATTCTCTTCCTTCTCCTCTGTTGCTTCTTCCCTCTTCTCAGCTCTCTCCTTGGCCACACATTCTCTTCCTTCTCCTCCTCTGTTTCACCCCCTGCTTCTGATCACCAGATCTCTCTGCTTCCTTCTTGGCCCTATGCTCCTCTCCCTCATCCACACCATGAATGCTGTATATGCTTGGACAAATACAGAGAGAAAGAACAAGTGAGAGAGCTGCCTTGTTCCCATACATTTCACCAAAAATGTGTGGATCAATGGCTGAGAATCATATCATGTTGTCCTCTCTGCAAACAAGGCATAGCCAGCTAG 933 0.4598 MNNSAEAEDQTAGTVRTRSASDSFMIEMVMTIYRARWFVFLRRVFQYQNGSRSDIGSNPFNSTPWMITELVALLVQITASSTTLAISQEERPVWPMRFWILGYEIGCVLSLLLLYGRYRLLHLDQSHVLLTVSDDLEQQRGREEEGKTRMCELMNKCRSSVELIFGMWFVMGNVWVFGCGYGSIHRAPKLHMLCISLLAWNAISYSFPFILFLLLCCFFPLLSSLLGHTFSSFSSSVSPPASDHQISLLPSWPYAPLPHPHHECCICLDKYREKEQVRELPCSHTFHQKCVDQWLRIISCCPLCKQGIAS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1575 310 ProSiteProfiles Zinc finger RING-type profile. 264 305 IPR001841 -
Lele02g1575 310 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 9 308 - -
Lele02g1575 310 SUPERFAMILY RING/U-box 260 308 - -
Lele02g1575 310 Pfam Ring finger domain 263 305 IPR001841 -
Lele02g1575 310 SMART ring_2 264 304 IPR001841 -
Lele02g1575 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 309 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1575 Lele-ChrLele02 19702100 19704395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1575 9 308 C3H Transcription Factor Family AT4G26580 59.740 1.91e-120 347