Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1568 ATGCCTGCAAGCTTAAGAAATCCCTCACTTCTCTCAATAAACTCTCTTCTCTTCTTCTCCTTCTCCTTCTCCTTCTCATGTTGCTACTCCATTGATGAACAAGGCCAAGCTCTTCTTGCATGGAAGAACAGTTTGAACAGTACGGGAGATGCAGTATTAGCATCTTGGAGTGCTTCGGATTCAAGCCCTTGCAAATGGGATGGTGTTCTCTGCAACTCCAGAGGAGATGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAAAGGCTCATTGCCTTCAAATTTTCAAGCTTTCAAGTCTTTGAAGGTTCTCGTGCTGTCATCAACCAACCTCACAGGTTTTATCCCAAGAGAAATTGGAGGCTGTGAGGAGCTTGTTTCTATTGATCTCAGTGGGAATTATCTCTCAGGTGAAATACCAGAAGATATTTGCAGGCTGAGTAAACTTGAAAGTTTGTCTCTCCATGCAAACTTTCTTGAAGGTAATATTCCTTCCAACATTGGGAATCTCTCTAGTCTTGTGAATTTGACACTCTATGACAACAAGCTCAGTGGTGAAATCCCAAAGAGTTTGGGGTTTTTAAGAAGGCTTCAAGTTTTGAGAGCAGGTGGGAATAAGAACCTTAAAGGTGAGCTGCCATGGGAGATTGGAAACTGCACCAGCTTGGTCATGTTGGGTCTTGCAGAAACCAGCATTTCTGGGAGCCTTCCTTCTTCAATAGGAATGTTGAATAACATTCAAACAATTGCTATTTACACAACTCTCATCTCAGGCTCAATTCCGGATGAGATTGGGAATTGCAGTGAGCTGCAGAATTTGTACCTGTATCAGAATTCTCTTTCAGGTCCAATCCCAAGTCAACTTGCAAATCTCAGAAAGCTTCAGAGTATTCTCTTATGGCAGAACAATCTAGTGGGGACAATCCCAGAAGAGCTTGGAGGCTGCACAGAGCTCAAAGTCATAGACTTTTCAGAAAACCTCCTCACTGGAACCATACCAATGAGCTTTGGGAAGCTTTCAAATATTGAAGAAATCCAGCTAAGTGTTAATCAGTTGACAGGTATTATACCTCCTGAGATTACCAATTGCACTTCTCTGACTCAGTTGGAAGTTGACAACAATGCTCTTTCTGGAGAGATTCCTTCTCTTATAGGCAACTTGAAAAGCTTGAATCTTTTCTTTGCATGGCAGAACAAGCTCACTGGGAAAATCCCAGATAGTCTATCTGAGTGCCAAGATCTTGAGGGACTTGATCTCTCTTACAACAATCTGATTGGTTCAATACCAAAATCACTTTTTGGGTTGAGGAATCTCACTAAACTCTTGCTTCTTTCCAATGAATTATCAGGCTTTGTTCCTCCTGATATAGGAAACTGCACGAGTCTCTTCAGGTTAAGGTTGAACAGAAATAGATTTTCTGGGTTCATTCCACCTGAGATAGGAAACTTGAAGAACCTCAACTTCATGGATATGAGCAGCAATCACTTTGTAGGGCAGATTCTTTCATCATTATCTGGATGCGAGAATCTTGAGTTTATTGACTTTCATTCAAATTCTCTCAGTGGTTCAATCCCAGAAGCTCTCCCCGGAAGTCTTCGATTCATGGATTTATCAGATAACAGGTTCACTGGTTCGTTGAGTCGTACCATTGGTTCATTAAGTGAACTAACCAAACTCAATCTGGGGAAGAATCAACTCAGTGGACAAATCCCAGAAGAGATCTCATCTTGTTCTAAGCTTCAACTTCTTGACCTGGGAAGCAATGATTTCTCTGGAGAAATTCCAGAGCAATTAGGTCAAATCCCATCGTTGGAAATCTCTTTAAATCTCAGCTTCAATCAGTTTTCTGGGCAAATCCCATCTCAAATCTCTGGTCTTACCAAACTGGGTGTTCTTGATATCTCCCACAACTTCTTCTCAGGGAATCTAAACTCTCTTTCTGACCTTCAAAACCTCGTTTCCTTAAACGTTTCATTCAACTGCTTCTCTGGTGAATTACCCGACACCCCATTTTTCAAAAAGCTGCCTTTAAGTGACCTCACCCCAAATAAAGGCCTCTATATCGCCGGTGGTGACGGTCTGACTCCGGTTGACGGAGTGGGACCCACTAAAGTCCATGCCAGATCAGCAATGAAGTTCATCATGTCCATTCTCTTAAGCATAAGTGCAGTATTTGTACTACTAACAATCTATGCTTTGGTACGTTGTCATATTCAAAACAGAGCAATCATGGGAGATAGCTCATGGGAGATGACTTTTTATCAGAAGCTCGTAATCTCCTCCATTGATGATGTCATCAAGAGCCTGACGTCATCCAACGTGATCGGCACCGGAAGCTCCGGCGTGGTGTACAGGATTGGGAAACAAGAACATGCATCGATGCAGAGGATCACAGAGAAGAGTGACGTGTATAGTTATGGAGTGGTTCTGTTGGAGGTGTTGACTGGGAGGCACCCACTGGACCCGACTTTGCCGGGTGGTGCACACATGGTTCAGTGGGTTCGGAACCACTTAGACAATAAAGGGGACCCATCTGATATTTTGGACCCAAAGCTGAGAGGGAGGGCTGAACCAGCCATGCATGAGATGCTTCAGACTTTGGCTGTGTCGTTTCTGTGTGTGAGCACTAAGCCTGAGGATCGTCCTACGATGAAGGACGTTGTGGCTATGCTTAAAGAAATCAGACCTGTTGATGAGTCCTCAAGGTTGGATTCTGATGAACTGAAGAAGAAGGCTAAATCTTCGTTACATGGCTCGCCTTATCCTGTTCCACCTCCTAAGCGTCTCGTCTCTCATCAGTCTTCTAACTGTTCCTTTCATTTCTCAGATGACTCAGTCTAA 2841 0.4333 MPASLRNPSLLSINSLLFFSFSFSFSCCYSIDEQGQALLAWKNSLNSTGDAVLASWSASDSSPCKWDGVLCNSRGDVEEISLKSVDLKGSLPSNFQAFKSLKVLVLSSTNLTGFIPREIGGCEELVSIDLSGNYLSGEIPEDICRLSKLESLSLHANFLEGNIPSNIGNLSSLVNLTLYDNKLSGEIPKSLGFLRRLQVLRAGGNKNLKGELPWEIGNCTSLVMLGLAETSISGSLPSSIGMLNNIQTIAIYTTLISGSIPDEIGNCSELQNLYLYQNSLSGPIPSQLANLRKLQSILLWQNNLVGTIPEELGGCTELKVIDFSENLLTGTIPMSFGKLSNIEEIQLSVNQLTGIIPPEITNCTSLTQLEVDNNALSGEIPSLIGNLKSLNLFFAWQNKLTGKIPDSLSECQDLEGLDLSYNNLIGSIPKSLFGLRNLTKLLLLSNELSGFVPPDIGNCTSLFRLRLNRNRFSGFIPPEIGNLKNLNFMDMSSNHFVGQILSSLSGCENLEFIDFHSNSLSGSIPEALPGSLRFMDLSDNRFTGSLSRTIGSLSELTKLNLGKNQLSGQIPEEISSCSKLQLLDLGSNDFSGEIPEQLGQIPSLEISLNLSFNQFSGQIPSQISGLTKLGVLDISHNFFSGNLNSLSDLQNLVSLNVSFNCFSGELPDTPFFKKLPLSDLTPNKGLYIAGGDGLTPVDGVGPTKVHARSAMKFIMSILLSISAVFVLLTIYALVRCHIQNRAIMGDSSWEMTFYQKLVISSIDDVIKSLTSSNVIGTGSSGVVYRIGKQEHASMQRITEKSDVYSYGVVLLEVLTGRHPLDPTLPGGAHMVQWVRNHLDNKGDPSDILDPKLRGRAEPAMHEMLQTLAVSFLCVSTKPEDRPTMKDVVAMLKEIRPVDESSRLDSDELKKKAKSSLHGSPYPVPPPKRLVSHQSSNCSFHFSDDSV 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1568 946 FunFam Putative LRR receptor-like serine/threonine-protein kinase 607 692 - -
Lele02g1568 946 MobiDBLite consensus disorder prediction 899 946 - -
Lele02g1568 946 MobiDBLite consensus disorder prediction 899 914 - -
Lele02g1568 946 FunFam Leucine-rich receptor-like protein kinase family protein 31 193 - -
Lele02g1568 946 SUPERFAMILY RNI-like 79 377 - -
Lele02g1568 946 Gene3D Ribonuclease Inhibitor 607 690 IPR032675 -
Lele02g1568 946 Gene3D Ribonuclease Inhibitor 430 528 IPR032675 -
Lele02g1568 946 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Lele02g1568 946 FunFam Leucine-rich receptor-like protein kinase family protein 334 606 - -
Lele02g1568 946 SUPERFAMILY Protein kinase-like (PK-like) 795 899 IPR011009 -
Lele02g1568 946 SMART LRR_typ_2 146 170 IPR003591 -
Lele02g1568 946 SMART LRR_typ_2 98 122 IPR003591 -
Lele02g1568 946 SMART LRR_typ_2 553 577 IPR003591 -
Lele02g1568 946 SMART LRR_typ_2 291 315 IPR003591 -
Lele02g1568 946 SMART LRR_typ_2 435 459 IPR003591 -
Lele02g1568 946 SMART LRR_typ_2 649 673 IPR003591 -
Lele02g1568 946 SMART LRR_typ_2 339 363 IPR003591 -
Lele02g1568 946 MobiDBLite consensus disorder prediction 929 946 - -
Lele02g1568 946 Gene3D Ribonuclease Inhibitor 204 429 IPR032675 -
Lele02g1568 946 Pfam Protein tyrosine and serine/threonine kinase 790 891 IPR001245 GO:0004672|GO:0006468
Lele02g1568 946 SUPERFAMILY L domain-like 571 667 - -
Lele02g1568 946 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Lele02g1568 946 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Lele02g1568 946 Pfam Leucine rich repeat 80 135 IPR001611 GO:0005515
Lele02g1568 946 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Lele02g1568 946 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 789 886 - -
Lele02g1568 946 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Lele02g1568 946 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 206 331 - -
Lele02g1568 946 Gene3D Ribonuclease Inhibitor 529 606 IPR032675 -
Lele02g1568 946 Gene3D Transferase(Phosphotransferase) domain 1 766 917 - -
Lele02g1568 946 SUPERFAMILY RNI-like 284 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1568 Lele-ChrLele02 19657356 19660785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1568 784 946 Receptor kinase-like Gene Family AT5G56040 66.463 4.11e-59 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1568 PK_Tyr_Ser-Thr 1.9e-06 CL0016