LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g1566	ATGTCACGCGCTGCGAAGTCGCGTCGAAAATTGAGCGCCAAGGGGATGGACCCGACAGTTGATTCAGTGCCAGGTAGACGACATTACGTGACTGCCTCTCTATCTGTCTCCGTGTTAGAAAATTCAAATGCGAATCCAAACCCAGTAGTACGAATTCTGATGAACATGGCATCACCTCATTGCTCAATCTATTCCATTATTTTTCGATTTCATATTCGTCGTTCCAAGGAAGAACAGAAAAACATGATTCTTAGTTTTTGTTTTTTTGGCAAAGACATGAATCTCGTTCTTCTCTATTCAATCCCCATAATTCAATATATTCCGTTTGCCTTCTCGTTTTCTCTCTCCTATCCCTCCCCTTCACGTATCAATTCGGGGTTCTTCAGGTTCTTTCCAATAAGACATAAATCTCCAATATATCTAATGGAGTTATCCTCTGGGCTTCATTTTTCTGGATTTCACATGAACGGTTCAGCACAGAGGGATGCTGGCGCAGAGCAACCTACAACTTCAGCTACTGACATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGAGCAGCATCCGGGAAGACTACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAGCGAGTTGTACTTGTTACTCAGGATTCTTTTTATCATAATTTGACTGAAGAGGAACTTACAAGAGTCCAAGATTACAACTTTGACCATCCCGATGCTTTTGATACTGAGGAATTATTACGGGTTATGGACAAGTTAAGACATGGACAAGCTGTAGATATTCCAAACTATGACTCAAAGAGTTACAAGAGTGACGTGTTTCCAGCAAGGAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGCTGATGAATATGAAGATATTTGTCGACACAGATGCTGATGTTCGTTTGGCTAGGAGAATTAGGCGTGATACTTGTGAGAAGGCTAGGGATATTGGTTTAGTGCTTGATCAGTATTCTAAATTTGTAAAGTCGGCTTTTGATGACTTTATTCTTCCAACAAAGAAATATGCTGATATCATCATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATCGTACAGCACATCCGAACAAAGCTTGGTCAACATGATTTGTGTAAAATATATCCCAATTTATATGTCATTCAAACAACTTTTCAGATAAGGGGTATGCACACCCTGATACGTGATTCTCAGACAACGAAACATGATTTTGTGTTTTATGCTGATCGTTTGATTCGTTTGGTTGTTGAACATGGCCTGGGGCATCTTCCATTTACGGAAAAGCAAGTAATAACTCCAACTGAATATGTATATACTGGTGTTGATTTTTGCAAGAGGTTATGTGGTGTCTCTGTTATCAGGAGTGGAGAGAGTATGGAAAATGCTTTACGTGCATGCTGTAAAGGTATCAAGATTGGTAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGCTAATATATGAGAAGTTGCCCAACGATATCTCAGATAGACATGTGTTACTATTGGATCCTATCCTAGGAACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTCTCAGAAAGGGTGTACCAGAGTCCAACATTATATTTCTCAACCTCATATCAGCACCTCGAGGTGTGCACTTGGTCTGCAAGAAATTTCCAAGAATAAAGATTGTGACATCTGAGATTGATTTTGGTTTGAATGAAGATTTTCGTGTTGTACCTGGCATGGGTGAGTTTGGGGACCGTTATTTTGGAACAGATGATGATGACGACGACCAGGTGGCCCCTTCGCAACAGTGA	1836	0.4041	MSRAAKSRRKLSAKGMDPTVDSVPGRRHYVTASLSVSVLENSNANPNPVVRILMNMASPHCSIYSIIFRFHIRRSKEEQKNMILSFCFFGKDMNLVLLYSIPIIQYIPFAFSFSLSYPSPSRINSGFFRFFPIRHKSPIYLMELSSGLHFSGFHMNGSAQRDAGAEQPTTSATDMYKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVTQDSFYHNLTEEELTRVQDYNFDHPDAFDTEELLRVMDKLRHGQAVDIPNYDSKSYKSDVFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTCEKARDIGLVLDQYSKFVKSAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTEYVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPRGVHLVCKKFPRIKIVTSEIDFGLNEDFRVVPGMGEFGDRYFGTDDDDDDQVAPSQQ	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g1566	611	Gene3D	-	383	598	IPR029057	-
	Lele02g1566	611	PANTHER	URIDINE KINASE	173	508	-	-
	Lele02g1566	611	Gene3D	-	175	382	IPR027417	-
	Lele02g1566	611	SUPERFAMILY	PRTase-like	382	599	IPR029057	-
	Lele02g1566	611	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	171	372	IPR027417	-
	Lele02g1566	611	Pfam	Uracil phosphoribosyltransferase	397	598	-	-
	Lele02g1566	611	TIGRFAM	udk: uridine kinase	178	379	IPR000764	-
	Lele02g1566	611	MobiDBLite	consensus disorder prediction	1	24	-	-
	Lele02g1566	611	Pfam	Phosphoribulokinase / Uridine kinase family	181	367	IPR006083	GO:0005524\|GO:0016301
	Lele02g1566	611	FunFam	Uridine kinase	176	382	-	-
	Lele02g1566	611	FunFam	Uridine kinase	383	598	-	-
	Lele02g1566	611	PRINTS	Uridine kinase signature	254	269	-	-
	Lele02g1566	611	PRINTS	Uridine kinase signature	209	220	-	-
	Lele02g1566	611	PRINTS	Uridine kinase signature	311	321	-	-
	Lele02g1566	611	PRINTS	Uridine kinase signature	179	196	-	-
	Lele02g1566	611	PRINTS	Uridine kinase signature	325	336	-	-
	Lele02g1566	611	PRINTS	Uridine kinase signature	347	360	-	-
	Lele02g1566	611	CDD	UMPK	181	379	IPR000764	-
	Lele02g1566	611	CDD	PRTases_typeI	456	571	IPR000836	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g1566	Lele-ChrLele02	19642873	19649844	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g1566	136	601	PRT Gene Family	AT4G26510	83.333	0.0	804

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele02g1566	02	19642873	19649844	Lele04g1558	04	20494122	20500238	hybridization