Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1552 ATGTTGGCTTCAGGTCTGATGGGCTCTCTAAATGAAAGACCAATTCAGGAGATCGAAAACGAGAGTCCTCATATCCCAGAAATATCTGATCAGAAGTCAGAATCTACCATGAAAGCTGAACAAGGATCATGTTCTGGAGAATTCTATGCCACACATCAGAAAACACTAAGGAGTATTGTCTGCAACAGTATACAAATTGTAATTTTCTCAAATCGACTCAACTTGCTTATGCCTCTTGGCCCGTTGGCAATTATTGTGGAGAGATTGACTAATCATCACGGTTGGGTCTTCACTCTGAGCTTGTTGGGTGTAATGCCTTTGGCTGAGCGGCTTGGTTTTGCTACAGAGCAGCTGGCGTTTTACTCTGGAGACACTGTTGGGGGTCTTCTAAATGCCACTTTTGGAAATGCAACAGAACTTATCATCTCTATATATGCATTGAAAAGAGGAATGACACGAGTTGTCCAACTCTCATTGCTGGGCTCAATTTTGTCCAACATGTTGTTGGTGCTTGGATGTGCATTCTTTTGTGGTGGGATTGTTTATACTAAGAAGGAGCAGGTTTTTAACAAGGCAACTGCTACAGTGAATGCAGGATTGTTATTGATGTCAGTCATGGGCCTACTTTTTCCTGCTGTTCTTCACTACACACGCACTGAGGTCCATTTCGGGAGCTCGGAGTTGGCCCTTTCAAGATTCAACAGCTGCATCATGCTTGTGGCTTATGCTGCGTACCTATTTTTCCAGTTAAATAGTCAAAGAAGTCTGTACCTCTCTTTGAATGAGGAGGACGGGAATCACGGAAACTGCTTAGAAGATGATGAATATCCTGATATCTCTAAATGGGAATCAGTAATCTGGCTTTCAATTATGACTGCTTTGATATCAATTCTGTCAGAATATTTAGTTGGTGCTATAGAGGGAGCATCAACTTCATGGAAAATGCCAGTGTCTTTTATCAGTGTAATATTGCTTCCCGTAGTGGGAAATGCTGCAGAGCATGCCAGTGCTATCATGTTTGCCAAGAAAGATAAGCTTGATATTTCCTTGGGAGTAGCAATAGGTTCCTCCACACAGATATCTATGTTTGTGATACCACTTTGCGTGATTGTTGGGTGGATAATGGGGCATCCAATGGACTTAAACTTTCAACTTTTTGAGACGGCAACGCTGTTTCTAACTGTTATTGTTGTAATCCTCTTGTTGCAGGAAGGGACTTCTAATTACTTCAAGGGACTTATTCTTATTCTATGCTATTTTATAGTGGCAGCTAGTTTCTTTGTACATTTAGATCCTTCTTAA 1302 0.4124 MLASGLMGSLNERPIQEIENESPHIPEISDQKSESTMKAEQGSCSGEFYATHQKTLRSIVCNSIQIVIFSNRLNLLMPLGPLAIIVERLTNHHGWVFTLSLLGVMPLAERLGFATEQLAFYSGDTVGGLLNATFGNATELIISIYALKRGMTRVVQLSLLGSILSNMLLVLGCAFFCGGIVYTKKEQVFNKATATVNAGLLLMSVMGLLFPAVLHYTRTEVHFGSSELALSRFNSCIMLVAYAAYLFFQLNSQRSLYLSLNEEDGNHGNCLEDDEYPDISKWESVIWLSIMTALISILSEYLVGAIEGASTSWKMPVSFISVILLPVVGNAAEHASAIMFAKKDKLDISLGVAIGSSTQISMFVIPLCVIVGWIMGHPMDLNFQLFETATLFLTVIVVILLLQEGTSNYFKGLILILCYFIVAASFFVHLDPS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1552 433 TIGRFAM cax: calcium/proton exchanger 79 427 IPR004798 GO:0006816|GO:0015369
Lele02g1552 433 Pfam Sodium/calcium exchanger protein 95 250 IPR004837 GO:0016020|GO:0055085
Lele02g1552 433 Pfam Sodium/calcium exchanger protein 285 424 IPR004837 GO:0016020|GO:0055085
Lele02g1552 433 Gene3D - 122 262 IPR044880 -
Lele02g1552 433 Gene3D - 270 428 IPR044880 -
Lele02g1552 433 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 33 431 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele02g1552 433 MobiDBLite consensus disorder prediction 17 34 - -
Lele02g1552 433 TIGRFAM caca2: calcium/proton exchanger 61 427 - -
Lele02g1552 433 FunFam Vacuolar cation/proton exchanger 272 428 - -
Lele02g1552 433 MobiDBLite consensus disorder prediction 13 37 - -
Lele02g1552 433 FunFam Vacuolar cation/proton exchanger 124 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1552 Lele-ChrLele02 19539790 19544359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1552 5 432 Antiporters AT1G55730 69.393 0.0 597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1552 02 19539790 19544359 Lele02g1552 02 19539790 19544359 ECH
Lele02g1552 02 19539790 19544359 Lele04g1541 04 20392962 20398110 hybridization