Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1526 ATGAAGAAAACCCCAGAACACCATCTGGTTTTTTCAAGCCAAAGTAATCAGAATGTAGGCAATGATACAAACAAGCACAATCAAAGGACTCGTTCTTATCTAAAGTCTTTCAAATCCTTTGTCAAGAAATTCGCAGTCGTTTTTGCAATCTTTGGCTCTGGCAAGAGAAAATCAGCTTCAGAAGTTGCAGGAACTGATATTAGAAGGAATAGAAGTAGAGCCAGACTGGTATCATCATTTTCAACTGATGTTTCATCTGAGAGTAACACCAAGAATTCGTCATGGAAGTTTTCTAATTCCTACGCATCTTCTAGCGCCACAAGTACTGGACAACTTGGAATGGGGAACTTCTCGTTTGAAGAACTTTACAAGGCAACAGGAAAATTTTCTGCAAATCAAATAATAGGGGAAGGTGGGTTTGGAACTGTGTATAAGGGGAAGCTCAATGATGGATCTCTTGTTGCCATAAAGCGCTCCAAGAAGACTTCGCATGACAAGAGCTTAGCAGAGTTCAAGAATGAAATAAATACTTTGTCAAAAATTGAGCATCTGAATCTTGTGAGATTATACGGATATTTGGAGCACGAAGATGAAAAGATGATTGTTGTTGAATATGTCGGCAATGGGACACTTCGAGAACATCTGAACGGTACAAGGGGAAATGGACTTGAAATTGGTGAGCGTCTAGACATTGCAGTTGATGTTGCTCATGCAATAACTTACCTTCATATGTACACAGATCATCCAATAATCCATAGAGACATCAAATCATCCAATATATTACTCACAGAAAAACTGAGGGTGAAAGTTGCAGACTTTGGATTTGCCCGTTTGGCTTCAGATGATCCTGCAGCAACCCATATCTCAACTCAGATAAAAGGAACAGCTGGCTACTTGGATCCTGAGTATCTCAGAACGTATCAACTCACCGATAAGAGCGATGTTTATTCATTCGGCGTATTGCTCGTGGAAATGATGACAGGGAGACATCCATTAGAACCAAAGAAACCTCTCAGTGAGAGAGTGACCATCAGATGGGCAATGCAGATGCTGAAACAAGGAGATGCTGTCATTGCCATGGATCCAAGGCTGTGGAGAAGCCCAGCTTCAACCATGGCAATGGAGAAGATTATGAAGCTCGCCTTCCAATGTCTTGCGCCGTTGAGGAACACACGACCTTCCATGAAGAATTGTGCAGAGGTTCTTTGGGGAATCCGAAAAGAGTTGAGAGATCAAGCTTTGGCTCACGTTCGTCCTCTTGCTTCTCACCATTCTGCAGATTTCACTAAAGGTGACAACGATAAGAAGAGTAAGCTTGTGTCATCACTTGATGGTGAAGATGGCGACAATAACTATAAAATTTCTATTTACGTTGTATTGATTGATTTTGAAATGGAAATGGCGGGGAAAGTGGAGGTCAATGGCAGTGGCACTTCTTCTGCTTCTGCTGTTTCTGACAAACTTCCGGCGGTGGCCAACCCATTGGCTGAAAAGCCTGACGAGATTGCGTCCGACATCAATTACCACGCGCAGTATAACACTCATTTCACCCCTTTCAAGTTTGAGCTGGAGCAAGCTTACTTTGCCACTGCTGAGAGTGTTCGCGATCGTCTCATTCGACAATGGAATGAAACGTTCGTCCATTTTCACAAAGCTGATCCCAAGCAAACATATTACCTATCTATGGAGTATCTTCAAGGTCGAGCTTTGACTAACGCAGTTGGAAACCTGAATATACAAGAAGCATATGCTGATGCTTTGTGCAAATTTGGACTCAAACTTGAAGAAATAGCAGAGCAGGAGAAAGATGCAGCTTTAGGAAATGGTGGTCTGGGCAGGCTTGCTTCTTGTTTTCTGGATTCCATGGCAACACTAAATTTGCCTGCTTGGGGTTATGGTCTGAGATATAGATATGGACTATTTAAGCAGATAATCACCAAGGAAGGCCAGGAGGAACTTGCAGAGGACTGGCTTGAGCAGAAGTTTAGCCCCTGGGAAGTTGCAAGGCATGACATTTCATACCCTGTCAGATTCTTTGGCCATGTTCAGGTTAATCCTAACGGAAGCCGAAAATGGGTTGGAGGAGAGGTTGTGCAAGCGTTGGCATATGATGTGCCAATTCCAGGATACCAAACCAAGAATACCATCAGTCTTCGCCTTTGGGAAGCAAAAGCTTGTGCTGAGGATTTCAATTTGTTTTTATTTAATGATGGACAACATGAATCTGCTTCTGTTCTTCATTCACGAGCTCAACAGATTTGTGCGGTTTTGTATCCTGGGGATGCTACGGAAGAAGGGAAACTTCTTAGGCTGAAGCAGCAATTCTTTCTCTGCAGTGCATCACTCCAGGACATAATTTTTCGGTTTAAAAAGAGGAGACCTGGAAAGGAATCTTGGACATGGTCTGAGTTTCCTAGCAAGGTTGCTGTGCAACTTAATGATACCCATCCTACCCTTGCGATTCCAGAGCTAATGCGACTACTTATCGATGATGAAGGGCTTGGATGGGATGAAGCATGGGATGTGACAACAAGGACAATTGCTTACACTAACCACACTGTTCTCCCTGAGGCACTTGAAAAATGGTCTCAACCTGTAATGTGGAAACTACTTCCTCGCCATATGGAAATCATAGAAGAAATAGACAAGAGGTTCACTGCATTTATAAGTGCAACACGGTTGGACCTTGAGAGTAAGCTTCCTGCCATGCGCATTGTGGACAATAATCCCCAGAAGCCAGTAGTTCGGATGGCAAATTTATGTGTGGTGTCCTCACACGCTGTGAATGGTGTGGCCCAGTTACACAGTGACATTCTAAAATCAGAATTATTTGCGGATTATGTTTCAATATGGCCAAAGAAGTTCCAAAATAAAACCAATGGCATCACACCTCGAAGATGGCTCCGTTTTTGTAGTCCTGAGCTCAGTAAGATAATCACTAAGTGGTTAAAAACTGATCAATGGGTAACCAATCTTGATTTACTGACAGGTCTTCGACAGTTTGCTGACAATGAAGAACTGCAAGCTGAATGGCTGTCTGCAAAGACAGCTAATAAGCAACGCTTGGCACAGTACGTTCTACAGGTGACAGGGGTGAGCATTGATCCAGATAGTCTGTTTGACATACAAGTCAAGCGCATCCATGAATACAAGAGACAGCTACTGAACATTCTGGGTGTGATTTATAGATACAAGAAGTTAAAGGAGATGAGCCCTGAAGAAAGGAAAAAAACAACTCCACGCACTGTGATGATTGGAGGGAAAGCTTTTTCTACGTATACAAATGCTAAAAGAATAGTAAGGCTGGTTAATGATGTTGGTGCTGTAGTCAACATTGATCCCGAGGTCAATAACTACTTGAAGGTTGTGTTCGTCCCAAATTACAATGTGTCTGTGGCAGAGGTGCTGATCCCAGGAAGTGAGCTGTCCCAGCACATCAGCACAGCAGGCATGGAAGCGAGTGGCACAAGCAACATGAAATTTGCATTAAATGGGTGCCTCATAATAGGTACTTTAGATGGAGCTAATGTTGAAATCAGGGAGGAAATTGGTGAGGAAAACTTTTTCCTCTTTGGCGCAACAGCAGAAGATGTCCCTCGTCTCCGACAGGAAAGAGAGAATGGACTGTTCAAATCAGATCCTCGTTTTGAAGAGGCAAAGAAGTTCATTAAGAGTGGGGTATTTGGAAGCTATGACTATAACCCACTGCTTGAGTCGTTGGAAGGAAATTCTGGTTATGGTCGTGGTGACTATTTTCTTGTAGGCCATGACTTCCCAAGCTACATGGATGCTCAGGAAAGGGTAGATGCTGCTTATCGGGATAAGAAAAGATGGCTAAAGATGTCCATTCTAAGCACAGCTGGGAGTGGAAAATTCAGCAGCGACAGGACCATTGCTCAGTATGCCAAGGAAATTTGGAACATAGAAGAGTGCCGCGTACCTTAA 3945 0.4312 MKKTPEHHLVFSSQSNQNVGNDTNKHNQRTRSYLKSFKSFVKKFAVVFAIFGSGKRKSASEVAGTDIRRNRSRARLVSSFSTDVSSESNTKNSSWKFSNSYASSSATSTGQLGMGNFSFEELYKATGKFSANQIIGEGGFGTVYKGKLNDGSLVAIKRSKKTSHDKSLAEFKNEINTLSKIEHLNLVRLYGYLEHEDEKMIVVEYVGNGTLREHLNGTRGNGLEIGERLDIAVDVAHAITYLHMYTDHPIIHRDIKSSNILLTEKLRVKVADFGFARLASDDPAATHISTQIKGTAGYLDPEYLRTYQLTDKSDVYSFGVLLVEMMTGRHPLEPKKPLSERVTIRWAMQMLKQGDAVIAMDPRLWRSPASTMAMEKIMKLAFQCLAPLRNTRPSMKNCAEVLWGIRKELRDQALAHVRPLASHHSADFTKGDNDKKSKLVSSLDGEDGDNNYKISIYVVLIDFEMEMAGKVEVNGSGTSSASAVSDKLPAVANPLAEKPDEIASDINYHAQYNTHFTPFKFELEQAYFATAESVRDRLIRQWNETFVHFHKADPKQTYYLSMEYLQGRALTNAVGNLNIQEAYADALCKFGLKLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQIITKEGQEELAEDWLEQKFSPWEVARHDISYPVRFFGHVQVNPNGSRKWVGGEVVQALAYDVPIPGYQTKNTISLRLWEAKACAEDFNLFLFNDGQHESASVLHSRAQQICAVLYPGDATEEGKLLRLKQQFFLCSASLQDIIFRFKKRRPGKESWTWSEFPSKVAVQLNDTHPTLAIPELMRLLIDDEGLGWDEAWDVTTRTIAYTNHTVLPEALEKWSQPVMWKLLPRHMEIIEEIDKRFTAFISATRLDLESKLPAMRIVDNNPQKPVVRMANLCVVSSHAVNGVAQLHSDILKSELFADYVSIWPKKFQNKTNGITPRRWLRFCSPELSKIITKWLKTDQWVTNLDLLTGLRQFADNEELQAEWLSAKTANKQRLAQYVLQVTGVSIDPDSLFDIQVKRIHEYKRQLLNILGVIYRYKKLKEMSPEERKKTTPRTVMIGGKAFSTYTNAKRIVRLVNDVGAVVNIDPEVNNYLKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEENFFLFGATAEDVPRLRQERENGLFKSDPRFEEAKKFIKSGVFGSYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDAQERVDAAYRDKKRWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEECRVP 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1526 1314 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Lele02g1526 1314 CDD GT35_Glycogen_Phosphorylase 505 1308 - -
Lele02g1526 1314 Pfam Carbohydrate phosphorylase 589 1308 IPR000811 GO:0005975|GO:0008184
Lele02g1526 1314 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 500 1308 IPR011833 GO:0004645|GO:0005975|GO:0030170
Lele02g1526 1314 Gene3D Glycogen Phosphorylase B; 962 1293 - -
Lele02g1526 1314 SUPERFAMILY Protein kinase-like (PK-like) 104 405 IPR011009 -
Lele02g1526 1314 MobiDBLite consensus disorder prediction 8 27 - -
Lele02g1526 1314 Gene3D Transferase(Phosphotransferase) domain 1 206 422 - -
Lele02g1526 1314 SMART serkin_6 129 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1526 1314 PANTHER GLYCOGEN PHOSPHORYLASE 485 1312 IPR000811 GO:0005975|GO:0008184
Lele02g1526 1314 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 1152 1164 IPR035090 -
Lele02g1526 1314 Gene3D Glycogen Phosphorylase B; 529 1309 - -
Lele02g1526 1314 CDD STKc_IRAK 135 402 - -
Lele02g1526 1314 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 206 416 - -
Lele02g1526 1314 FunFam Alpha-1,4 glucan phosphorylase 967 1293 - -
Lele02g1526 1314 ProSiteProfiles Protein kinase domain profile. 129 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1526 1314 Pfam Protein tyrosine and serine/threonine kinase 131 402 IPR001245 GO:0004672|GO:0006468
Lele02g1526 1314 FunFam Alpha-glucan phosphorylase 2, cytosolic 487 966 - -
Lele02g1526 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Lele02g1526 1314 MobiDBLite consensus disorder prediction 1 27 - -
Lele02g1526 1314 FunFam receptor-like protein kinase FERONIA 88 205 - -
Lele02g1526 1314 Gene3D Phosphorylase Kinase; domain 1 88 205 - -
Lele02g1526 1314 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 499 1312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1526 Lele-ChrLele02 19355892 19367250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1526 474 1314 Glycosyltransferase AT3G46970 82.164 0.0 1465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele02g1526 Phosphorylase 3.1e-301 CL0113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1526 02 19355892 19367250 Lele02g1526 02 19355892 19367250 ECH
Lele02g1526 02 19355892 19367250 Lele03g1269 03 7590734 7602464 hybridization
Lele02g1526 02 19355892 19367250 Lele04g1513 04 20201342 20208353 hybridization