Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1519 ATGGCTTCAACTGCTCTACAGTGGCTAAGTCTTGTCGCCATCATTTGGCTTCAAGCCATAAATGGCACCAACAACAACTTCCCTTCATACTCAACCCAACTGAAGCAGATCCTTTCGATTTCACAAGTGCAGCTCAATAACCTTGCATTTGCCTCCGATGCCGGAAAACTTCTTGGCTGGTTCTCCGGCATGGCTTCTGTTTGCCTTCCCCTCTGGCTTGTCCTCATGATGGGTTCAACCCTTGGGTTGATTGGTTATGGAGCGCAATATCTCTTCATTACAAACCAAATTTCGTCTCTGTCTTATTGGCATGTCTTCTTACTAACTCTTCTTGCTGGGAACAGCATTTGTTGGATTAACACTGTCTGTTATGTCATCGTATTAAGAAACTTCCCATCTCATCACCAAGTTGCCGTGGGCTTATCAACTAGTTATCAAGGGTTGAGTGCAAAGATCTACACCGAAATTGTTAATGTTCTTTCTCCTCACAAAAAAGCTCAAGCCTTTCTTCTCTTGAACTCTGTCTTACCTCTGGTAGCGAGCCTCGTAGCAATTCCTGTTACTAGAGAAATTGAAGTAGCAGGGCCTAAAAGACTGGGTGTTGGGTTTTTCCTAATGTTTGTTATTGCGATTCCCACTGGCATATATGCTGTTTTAAGCAGCTTGCAATTTGTGTCAAGCACACTATCTCCTACGAGTAATCTTATTGGTATGCTAGTGTCTCTTCTCTTGCCGTGTTTGGTTCCGATCTCAGAGAAGTTCAGTGATTTGGTGGGGTCATGGCAAACCCACAAAGAAGCAGTAAGTGTCCATCATCGTTCTTTGGAGGAGAACAACGATCCTGATGAGAAGAGAAGAAAGGAGAGTGAGATGAAAGAGGGAAAAGAAAAAGAAGATACCAGCAGAGAGTTTCATGAGGTTCGTGTCAGAGAAGAAATCGGAGTGACGTTAATGCTGAGAAGAATAGATTTCTGGTTATATTTCTTTGTCTACTTGTTTGGTGCAACACTGGGTTTAGTATATCTGAACAACTTGGGGCAAATTGCCGAATCCAGAGGCTCCTCTACTTCGTCTCTGGTGTCCTTGTCTTCATCTTTTGGATTCTTTGGCCGTCTCTTGCCATCTCTCATGGTCTACTTCTGTAGAGGTCAGGTTGGGATTTCAAGAACAGCATCAATGGCGGTGTTCATGGTTCCAATAACAGGATCATTCTTCTTGCTGCTTAACAAAACTGAGCTTGCTCTCTACACCAGCACTGCGATTATTGGAGTGTGTACTGGAGCTATCACTTCCATATCTGTGTCTATTACCACTGAGCTATTTGGCACCAAGTATTTCTCAGTGAACCACAACGTGGTGGTGGCCAACATTCCCATCGGCTCTTTCCTATTTGGCTTCTTGGCTGCTCTTATATATCTTAAAGAAGAAGGTGGAGATGGGACATGATTTGGAGGCTAAATCTTTTGGAGTTCTGAGGAAAGCCAGCTCAGTATTGTCAAAAAGTATAAGAAAGAAGAACCGAAAGAAATTGAAAAGCAACTTTATAAATCACCTAGTTATGGCAAACGCGACATGCTTCTCGAAAGAATATATTCACCTGGAAATGCTACGAGCAGAAGGCGAAATTTCACAGATAAGAAATGGGATGTGCAAGATGCTGTTGTAGAAGCAGAAGGCAAGGAATCGTCAACTGTAGAAAGTTGTGGTTCTGAGAAGAAAGATGCTAAATCTAGAGAGAATGAAGAGAATTCCTCCAATTTTGCAGAAAAATTGCAGAACACTGATACACAAATCTCGCCCTTAAAATCTGAACCTTCTATTACTGAGCCAGTCAAAGCTTCTGATTCTGATCAACAAAACAAACCAGATAGTTGTAGCGATGAACTTGGGTTCGAGAAAGAAAAAAATTCTTCCGATTGTGCAAGAAAATCCCAGGATACTGAGGCACAAGTCTCGCCCTCAGAACCTGAGCCTTCGATTAGCGACCAAATTAAAACTTCTGATTCAGATCAACAAAATAATAAATCAGATAGTTGCAGCGGTAAGCCTGCTTCAGAGAAAGAAGACACGGCGGAGGCAAAAGAAGAGAAGGAAGAGGAAGGAGAAGAATCGCGAGAGGAAACGAACAAAGCGGTGGAATGGTCGAAGGACGATCAGAAAAACCTGATGGATCTAGGGATTTCAGAGATTGAGAGAAACCGAAGGCTGGAGAGTCTGATAGAGAGAAGGAGAGCAAGACAACAAATGAAGCTGCAGATGGAGCAAGGTCTGAGTCTGACTGATTTAAAACGACAAATGAAGCTGCAGATGGCTCCTCTAAACATCGCAAGAACGGATCCGTTAAAATCTCCAAGGAATTACGGAGGGATCGAAGGATTAGAGATACCTGGATCGGCTCCGTCGGCTCTGCGGCGACAAATGCGAAACCCTTTTGATCTTCCGTACGATGCTGCCGAAGAGAAACCAAATCTCTCAGGAGATAGCTTCCACCAAGAGTTCATACCAAAGGACGTGACGTTTTATAGACATGAAAGCTTCAGTTATGGGGCTTCTTTACAATTTGATGAAGAGTCATACCCTTTCTTCATCAATGGAAGGAGGATTTCAGATAGGTTCAGAAGGCTTCCTGGTACAACCGCCATTTTCTTCCCGCCTTTTCTTCTTACTGATTTTGAAACAGAAATGCCTCTTTTGTTGCATTTCACTCTAGCAGATAAAGGAAACCATGACCTGATAATAGAAAAATTGTTCTCCAAAAGCATTGTTACTGGCATTGATATCAGTACTGGAGTTAAAGCTCCCAAACCACTCTTGGTCAAATTTGAAACAACAACAGATCAGCAAGAGAACACCAAAAGCAAAACTGAAAGCATATTTGGCCTGAGATGGAAGAAAGTGATGGAGAATGCTCAATTGCTAAAATCCTTATCAGCAGATCACAAAACTGAGTCAAGATTCATGGAAAAAAATATCAAACATGGGTTTGTTGAAACCGATCAAAAGATCCCAAACAATGACAAATTTGGAGTTTCTTCAGAGAAGCCAGAAGATGAATCAAACACTCCTCACCATCATCATCATTATCATATGCCTATTAATAATAAGTTCCTCAACTTCCCTATATCTACTGGTACTGCAATTTTTGAGGCTCCACTTGATTCTCTTTCATCTCCAACCATCAAGAACTCAGAAGACACACCTTTCCCAGAAGGATGCATTTTTCGTGAGCCAACATGTTCAATTGCTTCTGATTTACAAGTAGAGTTCTCAGAAATTGGCTCACCAACAACACTCACAGTAGATGGAGAATCTGTGATGTTTGATGGGGAGATTGGTAAAGACACTGTTCTTACTCCTAGGAGTGATGATTTAGCGCCAATAAAGTTAAGATCTTGTGATGAGGGTATTGCAGAAATGAGCAATAATAATAGCCCAAAGAGCAGTCTTATTCATATGCTGCAAAAAGTTGGAGAAGATGTTATAGATGTGAGTTCACTCTCCCCAACATCTGATTTGCATGGGGACAGCCCAACTCATGCAAAAATCAATTATGATTATAACATTTTCAGTGATATGAGAAAAGATGAGGCGGAAACTCAAGCTACACATCGTTCAGATTTTCTTATTGGTAGGTCTCCGGATCATCCACCTCATGAAACACGACTACAAAAGCCAGAGGCAAGTCATGGTTCTGAAAGGCAAAACCTTTCAGAAACTGAAGCACAAGTTGTGGATCATCATATGAGTTCACCCTCATATTGGCATGGGGACACTCCAACTCATGAAAGAATCAATTATGATTATAATGTTTTCGGTGATTTAAAAAAGGATGAGATGGAAACTGAAGCAACACAGCCTCCAAATTCTTCAAATTTTCTTATCAGTAGGTCTGTGGATTGTCCACCTCATGAATCAAAATCAGAAAAGCAAGAGGAAAGGCAAAAGCTTTCAGAAAATTCAGAAACTGAAGCACAAATTCTGGATCATCATCATGTGACTGATTCATCAACCACTGACATAGAGAACTCAAATAGTAATGAAGAAGGTCTAAGGCCACCAGTTGTGCATCAACATCAAGAATCAATCGATGCCGTGTCTATGAAGACATTTTCATCCCTTTCACCAAGATCATTGTCCCCAGACAAGACCCTTATGGATCATGTTTCTTCATCAGCTTTTAATATAGAGGGCATGACACAAGAGCCTCTAACTAATGAACTTTCTTCCAACCCTATGCCTCCTATTATGATTACTAGTGTCTCTAATGATTTTCGGGATCCTGCTGATCCTCATGTAGAAGAAAAAATCTCTGGCAAGGAGAATGATGCAGGACAAGAAAAGTTCAGGAATATGAAAACTTTAGAGGAAATTAATAACAAATCAGAAGTAGTCGAGAATTATGAAGTAACATCGATTCCTTCAAAAGTGACTGAGAATGTTGGTATTTCAACAACCATAGAAGATGGCCAGATGGCTGTAAAGTTGGCTCAACTTGCAGATGTTGACCCAACAAAGCCAAACAAGCCAACTGAAGAAGCAATTCCACCAAAGCCAAGTATGCTAAATGATAGTTCAGAAGAAGAGTATAATACACATAGTGAGCCAATGAAGAATGATGCAGAAATCAATGAGAAATTCAAGAATTACATCCTAGAAAATCCAGGTGAGACAAATGATAGCTCAGAAGAAGCCAATGAAGCACAAAATGAGTCAAAGAAGAATGACCCAAAAATCAGCAACAAGGTAGAAATCAACGAGCTGTCGAGCAATGACACCTCAGCAAAGTCAGGTAAGCAAAACGATAGCTGGGGAGAAGTGAGTAAAGTACAAAGTGATCCAAATGACAGCTATGAAAAAGTCAGCGATGTGGGAAGCGAGTCAAGAAAGAATGGTGCAGAAATCAGCAGTTACAAAGGTGTCAAAGAGAAGTTAGACAATGACATCTCTTTAGAGCCAGATCATAATTTAGAAAAAGTGAGTGATATACCTAAGGTTAATGAAGAAACCAGTTCAAGCACTGTGGAAGAATCAAACAAGAAGGAAGTCATGGTTATATCTAGTTCAGTAGGAACAAGTAAAGATAGCATTACAATAAATGCGAAAGAGCCTGAAGAAGCAGTTAATTTTGAAAAATGA 5136 0.4079 MASTALQWLSLVAIIWLQAINGTNNNFPSYSTQLKQILSISQVQLNNLAFASDAGKLLGWFSGMASVCLPLWLVLMMGSTLGLIGYGAQYLFITNQISSLSYWHVFLLTLLAGNSICWINTVCYVIVLRNFPSHHQVAVGLSTSYQGLSAKIYTEIVNVLSPHKKAQAFLLLNSVLPLVASLVAIPVTREIEVAGPKRLGVGFFLMFVIAIPTGIYAVLSSLQFVSSTLSPTSNLIGMLVSLLLPCLVPISEKFSDLVGSWQTHKEAVSVHHRSLEENNDPDEKRRKESEMKEGKEKEDTSREFHEVRVREEIGVTLMLRRIDFWLYFFVYLFGATLGLVYLNNLGQIAESRGSSTSSLVSLSSSFGFFGRLLPSLMVYFCRGQVGISRTASMAVFMVPITGSFFLLLNKTELALYTSTAIIGVCTGAITSISVSITTELFGTKYFSVNHNVVVANIPIGSFLFGFLAALIYLKEEGGDGTXFGGXIFWSSEESQLSIVKKYKKEEPKEIEKQLYKSPSYGKRDMLLERIYSPGNATSRRRNFTDKKWDVQDAVVEAEGKESSTVESCGSEKKDAKSRENEENSSNFAEKLQNTDTQISPLKSEPSITEPVKASDSDQQNKPDSCSDELGFEKEKNSSDCARKSQDTEAQVSPSEPEPSISDQIKTSDSDQQNNKSDSCSGKPASEKEDTAEAKEEKEEEGEESREETNKAVEWSKDDQKNLMDLGISEIERNRRLESLIERRRARQQMKLQMEQGLSLTDLKRQMKLQMAPLNIARTDPLKSPRNYGGIEGLEIPGSAPSALRRQMRNPFDLPYDAAEEKPNLSGDSFHQEFIPKDVTFYRHESFSYGASLQFDEESYPFFINGRRISDRFRRLPGTTAIFFPPFLLTDFETEMPLLLHFTLADKGNHDLIIEKLFSKSIVTGIDISTGVKAPKPLLVKFETTTDQQENTKSKTESIFGLRWKKVMENAQLLKSLSADHKTESRFMEKNIKHGFVETDQKIPNNDKFGVSSEKPEDESNTPHHHHHYHMPINNKFLNFPISTGTAIFEAPLDSLSSPTIKNSEDTPFPEGCIFREPTCSIASDLQVEFSEIGSPTTLTVDGESVMFDGEIGKDTVLTPRSDDLAPIKLRSCDEGIAEMSNNNSPKSSLIHMLQKVGEDVIDVSSLSPTSDLHGDSPTHAKINYDYNIFSDMRKDEAETQATHRSDFLIGRSPDHPPHETRLQKPEASHGSERQNLSETEAQVVDHHMSSPSYWHGDTPTHERINYDYNVFGDLKKDEMETEATQPPNSSNFLISRSVDCPPHESKSEKQEERQKLSENSETEAQILDHHHVTDSSTTDIENSNSNEEGLRPPVVHQHQESIDAVSMKTFSSLSPRSLSPDKTLMDHVSSSAFNIEGMTQEPLTNELSSNPMPPIMITSVSNDFRDPADPHVEEKISGKENDAGQEKFRNMKTLEEINNKSEVVENYEVTSIPSKVTENVGISTTIEDGQMAVKLAQLADVDPTKPNKPTEEAIPPKPSMLNDSSEEEYNTHSEPMKNDAEINEKFKNYILENPGETNDSSEEANEAQNESKKNDPKISNKVEINELSSNDTSAKSGKQNDSWGEVSKVQSDPNDSYEKVSDVGSESRKNGAEISSYKGVKEKLDNDISLEPDHNLEKVSDIPKVNEETSSSTVEESNKKEVMVISSSVGTSKDSITINAKEPEEAVNFEK 1711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1519 1711 MobiDBLite consensus disorder prediction 565 585 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1195 1241 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 560 717 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1665 1679 - -
Lele02g1519 1711 SUPERFAMILY MFS general substrate transporter 6 472 IPR036259 -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 626 642 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1497 1679 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 643 680 - -
Lele02g1519 1711 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 478 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1565 1580 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1010 1025 - -
Lele02g1519 1711 Coils Coil 687 711 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 703 717 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1195 1233 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1403 1417 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1635 1664 - -
Lele02g1519 1711 Pfam Nodulin-like 7 250 IPR010658 -
Lele02g1519 1711 CDD MFS_Mch1p_like 6 472 - -
Lele02g1519 1711 Gene3D MFS general substrate transporter like domains 267 489 IPR036259 -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1301 1336 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1002 1029 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 272 299 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 586 625 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1581 1618 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1277 1358 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1403 1434 - -
Lele02g1519 1711 MobiDBLite consensus disorder prediction 1527 1546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1519 Lele-ChrLele02 19288495 19298581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1519 1 491 Nodulin-like Gene Family AT2G30300 48.310 1.09e-128 410
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1519 02 19288495 19298581 Lele03g1262 03 7527786 7533564 hybridization
Lele02g1519 02 19288495 19298581 Lele04g1504 04 20132840 20139094 hybridization