Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1513 ATGGCAACTTTTGTTGGTTTCTTGGCTAAGTTCGTCTCTCTTTTCATCCTCTTTGTCCACCTCGGCTGCTTTATTTTCTCCACCTCCGCCGTCTCCTGCGGTAACGGCGGAGAACAATGTGACCGGAAGTCCTCGTCAAAGAAACGCAAGGTATCCCCTGTTTTGCAGTCGCAGCATTCTTCTCCTTCCCATCCCAAGTTCAAAACCAGTAAGGCTATTTCTTCTTCTTGGACTTTCATCAAGCACCTTTTCTCCCACAAATCTTGCAAAACCAGTGACGTTGTTCACGGATCGCCGCAATCATCCGCCTCCACTGCTATTTCTGCTGGTTCCGCGGTCTCCGCCGCACTGCCTTCTCTGACATCCACCAGATCTTCCCAGCAGTCGTTGGTCTCTCTGGCGCAGGCCGAAGATCCTCCCGGGAAAAAACCATGTGCATCGTGCCCTGAATCCGATATCGCCGCCGATAACAACCACTTCTTTCCCCTCCGCAATGACATCTTCCCCTGCACCGCCTGCGGCGAGGTTTTCCAGAAACCACAAGCTCTCGAACAGCATCAATCGCTCAAGCACGCCGTGTCGGAGCTGGTGGAGACGGAGGCTGGACATAACATAGTACGGATAATATTCAAGTCGGGTTGGACCAACACACAGAAATGCCCCAGAATAAGTCGGATCCTGAAGATCCATAACAGCCCGAAGATCCTCTCCAAGTTCGAAGAATACAGAGAGACAGTGAAGGCCAAGGCCGCCCGAAACGGCACCGTAAAGAAGCGCGACGAAAGATGCATAGCGGACGGCAACGAGCTCATGAGATTCCACTGTTCCACATTCCTCTGCGAATTAGGACTCAACGGTAATTCCGGCATTTGCGGCCAGCAATATTGTAATATCTGTGGGATCATCAAATCGGGGTTCTCACCCAAGTTGGACGGAATCTCCACGCTATCGACGAGCTGTAGAGCTCACGTGGCCATCCCGGAGGAGGTGGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCCATGCTGGTGTGCCGGGTCATAGCGGGTCGGATCGGCACTGACTCGGACGAGGTCGACAAAGAGGACGGAGGTTTTGATTCGGTGATGGCGCGAGGAGGAAGCGGAGTTTATACCCGGACGGACGAAGAGGAGCTATTGGTGTTCAACCCTAGAGCTGTGCTCCCATGCTTTGTGATTGTGTATAGCGTGTGA 1218 0.5296 MATFVGFLAKFVSLFILFVHLGCFIFSTSAVSCGNGGEQCDRKSSSKKRKVSPVLQSQHSSPSHPKFKTSKAISSSWTFIKHLFSHKSCKTSDVVHGSPQSSASTAISAGSAVSAALPSLTSTRSSQQSLVSLAQAEDPPGKKPCASCPESDIAADNNHFFPLRNDIFPCTACGEVFQKPQALEQHQSLKHAVSELVETEAGHNIVRIIFKSGWTNTQKCPRISRILKIHNSPKILSKFEEYRETVKAKAARNGTVKKRDERCIADGNELMRFHCSTFLCELGLNGNSGICGQQYCNICGIIKSGFSPKLDGISTLSTSCRAHVAIPEEVEEEFKFMNVKRAMLVCRVIAGRIGTDSDEVDKEDGGFDSVMARGGSGVYTRTDEEELLVFNPRAVLPCFVIVYSV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1513 405 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 75 403 - -
Lele02g1513 405 ProSiteProfiles Zinc finger C2H2 type domain profile. 168 196 IPR013087 -
Lele02g1513 405 Gene3D - 192 404 - -
Lele02g1513 405 MobiDBLite consensus disorder prediction 50 69 - -
Lele02g1513 405 SUPERFAMILY ADP-ribosylation 193 404 - -
Lele02g1513 405 MobiDBLite consensus disorder prediction 33 69 - -
Lele02g1513 405 ProSitePatterns Zinc finger C2H2 type domain signature. 170 191 IPR013087 -
Lele02g1513 405 MobiDBLite consensus disorder prediction 128 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1513 Lele-ChrLele02 19245851 19247068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1513 77 405 C2H2 Transcription Factor Family AT2G29660 54.572 6.68e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele02g1513 None None None