Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1510 ATGGAAGGGCAGAGCCAGACGATGATGCCTCTGAGCAACCCTCCGGCTGCCATTTCCATGCCCCGATCATCTTCTTCAACAGGGCCTCCTTTGAGCGCCATAGACAGGTTCTTGAGGGGCCAACTCAGTCAGTTGTCTGCCCTGTGGCCTAACATTGACGTCGACGACATCGAAGCAAGTTTCATGGATGAGTTCATAGCAAATAATGAAGTTCACCAGATGATTATGCCTACAGTACTGAAGAAGCAAGTTCATGTTCTGGAGAAGAAAGCTTCTGGTAATTCATCAATGGTGGTAGGGAAGAGAATGAATAGGAAAGGGTCTTCTTCTTCTGCGTCGTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAACTGATGAAGCTGGTGAATGAATATGGAGTGAGGAAATGGGCACAGATAGCTGAGAATTTGGAAGGAAGAGTTGGGAAGCAATGCAGAGAGAGATGGCATAATCATCTACGTCCTGATATTAAGAAGGATAGTTGGAGTGAGGAAGAAGATAAAATATTGGTAGAAGCACATGCAAAGGTGGGGAATAGGTGGGCTGAGATAGCAAAGAGAATTCCAGGCAGAACAGAGAATGCTATCAAGAACCATTGGAATGCCACCAAAAGGAGACAGAACTCCAAGAGAAACCACAACAAATCTTCAAACAAAACCTCCAATAACAACAACAACAATGGAAGAAAGCCTCCTTCTTCCATTCTTCAAGATTACATTAAAAGCATCAAGACCCTCTCCAATAATAACAACAATGACCACCTTCTTCAGGGCCCGCCTCATGATGAAAACCAATTCAACCTTGTGATTTCTGATCTCCATCATCAAGATCCCTCTCATGATGAACCAGTGATGGCTGAAGCATTTGATGATGAGCTCCTCTTCATGCAACAGTTCTTCCCTGAGAATTATCAGAACCATCAGGTTCTTCAGTCCACTCTGGATTTTTATCGAACAGATGGTGGGCACGAGGGTTATCTTCCTCAACAGAGTACTGTTACTGCTACTATTGATGCTCCCACGAAACACCACCACCACCATCATTCTGATATGTTTCTGGCTCAGTTATTGAATGGGGTTGGTTATAATTCATCCATTTTCTGCTGTGATTATGGAAAAGATCAAAATTTGAACATGGGTTATGATCATCAGCAAGCTTGGTATGAAGCAATGAGAGAGATGGATTTGATGGAATTGGTTTCCTCTCAGCTTTCAACTAGCTCCAGCAATAGTGTCTTCTAG 1269 0.4342 MEGQSQTMMPLSNPPAAISMPRSSSSTGPPLSAIDRFLRGQLSQLSALWPNIDVDDIEASFMDEFIANNEVHQMIMPTVLKKQVHVLEKKASGNSSMVVGKRMNRKGSSSSASLIKGQWTDEEDRKLMKLVNEYGVRKWAQIAENLEGRVGKQCRERWHNHLRPDIKKDSWSEEEDKILVEAHAKVGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSKRNHNKSSNKTSNNNNNNGRKPPSSILQDYIKSIKTLSNNNNNDHLLQGPPHDENQFNLVISDLHHQDPSHDEPVMAEAFDDELLFMQQFFPENYQNHQVLQSTLDFYRTDGGHEGYLPQQSTVTATIDAPTKHHHHHHSDMFLAQLLNGVGYNSSIFCCDYGKDQNLNMGYDHQQAWYEAMREMDLMELVSSQLSTSSSNSVF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1510 422 FunFam Transcriptional activator Myb isoform A 115 168 - -
Lele02g1510 422 MobiDBLite consensus disorder prediction 223 243 - -
Lele02g1510 422 MobiDBLite consensus disorder prediction 1 30 - -
Lele02g1510 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 167 217 IPR017930 -
Lele02g1510 422 Gene3D - 169 241 - -
Lele02g1510 422 SUPERFAMILY Homeodomain-like 113 209 IPR009057 -
Lele02g1510 422 Gene3D - 115 167 - -
Lele02g1510 422 PANTHER MYB PROTEIN-RELATED 103 237 - -
Lele02g1510 422 CDD SANT 170 213 IPR001005 -
Lele02g1510 422 CDD SANT 119 162 IPR001005 -
Lele02g1510 422 ProSiteProfiles Myb-like domain profile. 163 213 IPR001005 -
Lele02g1510 422 MobiDBLite consensus disorder prediction 201 243 - -
Lele02g1510 422 SMART sant 115 164 IPR001005 -
Lele02g1510 422 SMART sant 167 215 IPR001005 -
Lele02g1510 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 166 IPR017930 -
Lele02g1510 422 Pfam Myb-like DNA-binding domain 119 176 - -
Lele02g1510 422 ProSiteProfiles Myb-like domain profile. 111 162 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1510 Lele-ChrLele02 19231595 19233965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1510 28 422 MYB Transcription Factor Family AT5G58850 37.558 3.90e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele02g1510 Myb_DNA-bind_6 5.1e-19 CL0123