Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1507 ATGCCGACCATTGCCGGGCGTAAGCTCGCCAAGGAAGCTCTACCTGAGACCATGGCCATCGTGCCAGAGAAGACGGCTTCCGATGCCCGATCTGACGCCAATTGCACTCCTCGCAAGAGGAAATTGAGATCCAATGGGCCGCTGATTGTGGACAGTCCGATCTCTTCGCCCACTAAATGGAAATCGCCTCGCCGATGTAGCAGTGAGAGCCCAAATCGTGCTGTCACCGAGAATGAGATGGTTACTAATGAAGGTGAAATCAAATCTCATAAATCGCAGTTGAAGTCAATGCAGGATGGTTTTGCTGATAAACCGAAATGGAATCCCAAAGCTGGTGAGCAAGTCAGTACAGTGAAGGATGCATTGCACGTGTCTATGGCACCATCTACAATTATCTGCCGTGAAGACGAGCAGAATATGGTTTTCGAGTTCTGTAAGTCATGCGTTGAATATAAGAAGGCCGGGAGTATGTACATATGTGGATGTCCTGGTACTGGAAAATCGCTATCCATGGAGAAAGTAAAAGAGCTTTTAGTCGATTGGGCTAGACAGGCAGGCTTCCTTCAGCCCGATGTCTTGTCTGTCAACTGTACATCACTTGCTAATACATTTGACATTTTCAGCAAGATACTTGGATTAAACCAACCACGGGGGAAAAAGACTTCAGCTTCTCCCTTACAACAACTTCAGAGCTTGTACTCTAAAAAATCATCTAGCCAGAACATGATATTGATAGTGGTTGACGAATTAGATTATCTAATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCATGCTCGCTACTTTCCCATTTTCTAGATGTATATTAATAGGGATATCAAATGCAATTGACCTTGCTGATCGTTTTCTTCCAAGGTTGAAATCATTAAACTGCAAGCCTATAATTGTAACATTTCGAGCATACTCTAAAGACCAGATCCTTAGCATTCTGAAAGAAAGGCTAAGGGAACTTCCTTACACTGTGTTTCAACATCAAGCACTAGAGCTCTGTGCTAGGAAAGTTGCTGCTGCTTCTGGAGACATGCGAAAAGCTCTTTGTATTTGCAGGAGTGCAATTGAGATCCTGGAGGCACAAATTAGAGAATCTATTGGCCTTTCAGAAATTTCATTGGAAGAGAAAGCTTCCCCTCCACAAGACATAGCTTCTGACCTCGATCATGCTAGAAAACAAGAATTTGATGTTGAGACACTGACTAAAAAGTCTGCATCAGTTCCGATTGAGTCAACAATAGTCAATGATGTAGGCAACTTAGTAAGGATTGATCATATGGCTCTTGCCTTGTCCAAGACATATAGATCTACTGTGGTGGATACAATACAATCTCTACCACATCATCAACAGATTATCCTTTGCTCTTCAATGAAACATTTCCGTGGATCAAAGAAAGATACAATCCTTGGCGAGTTGTACAAATCTTACGCGGGCATATGCAAATCATCACTGATTCCTCCAGCTGGAATTTTGGAATTTTCAAATATGTGCAGAGTATTGAGTGATCAGGTATCCATGACGACGATGTTTATTGTAAATGTTTCTTTAGAAGTAGCTATCTGTCCCTGGCGTTCAAAGAATTTTACCAACTTGGAAAAGAAGAATGACCAATTTATACATGAAAATCGCAGGGGCTTATTAAGCTAG 1662 0.4224 MPTIAGRKLAKEALPETMAIVPEKTASDARSDANCTPRKRKLRSNGPLIVDSPISSPTKWKSPRRCSSESPNRAVTENEMVTNEGEIKSHKSQLKSMQDGFADKPKWNPKAGEQVSTVKDALHVSMAPSTIICREDEQNMVFEFCKSCVEYKKAGSMYICGCPGTGKSLSMEKVKELLVDWARQAGFLQPDVLSVNCTSLANTFDIFSKILGLNQPRGKKTSASPLQQLQSLYSKKSSSQNMILIVVDELDYLITKDRAVLHDLFMLATFPFSRCILIGISNAIDLADRFLPRLKSLNCKPIIVTFRAYSKDQILSILKERLRELPYTVFQHQALELCARKVAAASGDMRKALCICRSAIEILEAQIRESIGLSEISLEEKASPPQDIASDLDHARKQEFDVETLTKKSASVPIESTIVNDVGNLVRIDHMALALSKTYRSTVVDTIQSLPHHQQIILCSSMKHFRGSKKDTILGELYKSYAGICKSSLIPPAGILEFSNMCRVLSDQVSMTTMFIVNVSLEVAICPWRSKNFTNLEKKNDQFIHENRRGLLS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1507 553 Pfam AAA lid domain 330 366 IPR041083 -
Lele02g1507 553 MobiDBLite consensus disorder prediction 49 71 - -
Lele02g1507 553 Gene3D - 111 298 IPR027417 -
Lele02g1507 553 PIRSF Cdc6 6 519 IPR016314 GO:0006270|GO:0051301
Lele02g1507 553 Pfam CDC6, C terminal winged helix domain 458 508 IPR015163 -
Lele02g1507 553 CDD AAA 137 298 - -
Lele02g1507 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 374 IPR027417 -
Lele02g1507 553 MobiDBLite consensus disorder prediction 21 71 - -
Lele02g1507 553 Gene3D - 299 392 - -
Lele02g1507 553 FunFam Cell division control protein 112 297 - -
Lele02g1507 553 Pfam AAA domain 152 269 IPR003593 -
Lele02g1507 553 SUPERFAMILY "Winged helix" DNA-binding domain 443 507 IPR036390 -
Lele02g1507 553 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 62 509 - -
Lele02g1507 553 Gene3D - 443 516 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1507 Lele-ChrLele02 19207241 19212164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1507 1 509 Core DNA Replication Machinery Family AT1G07270 55.078 0.0 529