Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1500 ATGGAAGATGACATAGAGAAGAAAGGAGAAGGAAGTGGGAAGAAGAATATGGTGATGGAGAGGAAGAAGTCGGATCTAATAGTGACGATGCAGAGAGAGAATAGCAATGGCGGAATGAGAGGCCAAGTGTTGAGGAGAATTATGGGAAACTTGCAAGAGGTTATCTTCGGCACCAAGCTTGCCGTGCTTTTTCCCGCCGTCCCTCTCGCCGTTGCCGCTGATACCTATGACTTTGGACGAGAGTGGATATTTGCTTTGAGCTTACTTGGACTGGCCCCTCTAGCTGAACGTGTTAGCTTTCTCACAGAACAAATCGCATATTTCACTGGCCCAACAGTTGGAGGGCTTCTGAATGCAACATGTGGGAATGCAACAGAGATGATAATAGCACTATTGGCACTTCACAAGAACAAAATCAATGTCGTCAAGTTCTCTCTTCTGGGTTCAATTCTCTCAAACCTCCTCTTAGTTCTTGGCTCCTCACTTCTCTGCGGAGGCCTTGCCAACCTCAAGAAAGAACAGAGATATGACAGAAAACAGGCAGATGTAAACTCACTTCTTTTGCTTTTGGGGTTGCTCTGCCATTTACTGCCATTGATCTTCAAGTATGCCCTAACAGGGGACCATTACCCTGTAGCCACTAGTACTCTTCAATTGTCAAGAGCAAGTAGTATTGTCATGCTTCTTGCTTATGTTGCTTATATCTTCTTCCAACTGAAAACTCACAGACAGATATTTGATTCCCCAGAGGAAGATGGAGAAGAAGAGAAGGCTGTGATAGGATTTTGGGTAGCATTTACTTGGTTGGTGGGCATGACACTTCTCATATCTTTGCTGTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCAGATTCTTGGGGTATTTCTGTGAGCTTCATTAGCATAATTTTGCTGCCAATTGTGGGGAATGCTGCAGAACATGCTGGTTCAATCATATTCGCTTTTAAGAACAAGCTGGATTTATCTCTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGCATAAAAATGGACCTGGATTTTAATCTCCTAGGAACAGGGTGTCTTGCTTTGGCGATAATAGTCACAGCTTTCACTTTGCAGGATGGAACTTCACACTATATGAAAGGAGTGGTACTTTCCCTGTGTTACATCGTCATGGCTGCTTGCTTTTTTGTCCATAAAGCTCCTTTGGCTGATCAAATTCCAGGGCAGAATGTTAGATTTCAACCATCTATGGACACCATGGTCACTTGA 1305 0.4345 MEDDIEKKGEGSGKKNMVMERKKSDLIVTMQRENSNGGMRGQVLRRIMGNLQEVIFGTKLAVLFPAVPLAVAADTYDFGREWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHKNKINVVKFSLLGSILSNLLLVLGSSLLCGGLANLKKEQRYDRKQADVNSLLLLLGLLCHLLPLIFKYALTGDHYPVATSTLQLSRASSIVMLLAYVAYIFFQLKTHRQIFDSPEEDGEEEKAVIGFWVAFTWLVGMTLLISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDLSLGVAMGSATQISMFVVPLSVIVAWIMGIKMDLDFNLLGTGCLALAIIVTAFTLQDGTSHYMKGVVLSLCYIVMAACFFVHKAPLADQIPGQNVRFQPSMDTMVT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1500 434 FunFam Vacuolar cation/proton exchanger 111 255 - -
Lele02g1500 434 TIGRFAM caca2: calcium/proton exchanger 47 408 - -
Lele02g1500 434 Coils Coil 433 434 - -
Lele02g1500 434 Pfam Sodium/calcium exchanger protein 265 406 IPR004837 GO:0016020|GO:0055085
Lele02g1500 434 Pfam Sodium/calcium exchanger protein 82 239 IPR004837 GO:0016020|GO:0055085
Lele02g1500 434 FunFam Vacuolar cation/proton exchanger 256 409 - -
Lele02g1500 434 TIGRFAM cax: calcium/proton exchanger 65 408 IPR004798 GO:0006816|GO:0015369
Lele02g1500 434 Gene3D - 260 409 IPR044880 -
Lele02g1500 434 Gene3D - 111 259 IPR044880 -
Lele02g1500 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 31 413 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1500 Lele-ChrLele02 19159533 19162202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1500 21 416 Antiporters AT2G38170 66.584 0.0 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1692 25 24604647 24611650 Lele02g1500 02 19159533 19162202 CCT
Lele26g1694 26 20471041 20475198 Lele02g1500 02 19159533 19162202 CCT
Lele27g0396 27 3572925 3582878 Lele02g1500 02 19159533 19162202 CCT
Lele28g1698 28 19911706 19917379 Lele02g1500 02 19159533 19162202 CCT
Lele02g1500 02 19159533 19162202 Lele02g1500 02 19159533 19162202 ECH
Lele02g1500 02 19159533 19162202 Lele03g1242 03 7400510 7404376 hybridization
Lele02g1500 02 19159533 19162202 Lele04g1484 04 20012874 20015629 hybridization