Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1495 ATGACAAAACTCTCGCATTCCTGTATAACTACAAAATTATCATTTCTTTGCCCTCGCAGTCTCACTTGCGGATCTAGTCGGCGAACCAGAGTGCGTGGAAGAAGCATAGGGATGGCGAAAACGGCGTCGTCGTTGCTCTGGACACTGTTCCTCTTCGGCGCTCTCGCTCTCATCCAGGCGAAGAAGTCGAAGGAAGATTTGAAAGAAGTGACAAACAAGGTTTATTTCGACATCGAGATTGATGGAAAGCCTGCCGGTCGTGTTGTAATGGGTCTTTTTGGGAAGGCAGTTCCAAAAACTGCAGAAAACTTTCGAGCTCTTTGCACAGGGGAGAAAGGAACTGGAAAAAGTGGAAAGCCTCTCCATTACAAGGGCAGCACGTTCCACAGGATTATTCCTAGCTTTATGATCCAAGGAGGTGATTTCACACAAGGCAACGGAATGGGCGGTGAGTCAATCTATGGAGAGAAGTTTGCGGATGAGAACTTCAAGCTGAAGCATACTGGACCAGGACTTCTATCAATGGCAAACGCTGGTCCTGATACCAATGGTTCACAATTCTTCATTACAACGGTGACAACTAGCTGGTTGGATGGAAGGCACGTCGTGTTTGGGAAAGTGATTTCTGGAATGGATGTGGTGTACAAGATGGAGGCCGAAGGAAAGCAAAGTGGCACTCCCAAAAGCAAGGTCGCCATTGCTGATAGCGGTGAACTCCCATTATAA 726 0.4738 MTKLSHSCITTKLSFLCPRSLTCGSSRRTRVRGRSIGMAKTASSLLWTLFLFGALALIQAKKSKEDLKEVTNKVYFDIEIDGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGTGKSGKPLHYKGSTFHRIIPSFMIQGGDFTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVISGMDVVYKMEAEGKQSGTPKSKVAIADSGELPL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1495 241 CDD cyclophilin_ABH_like 73 237 - -
Lele02g1495 241 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 73 239 - -
Lele02g1495 241 SUPERFAMILY Cyclophilin-like 70 239 IPR029000 -
Lele02g1495 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 128 140 IPR002130 GO:0000413|GO:0003755
Lele02g1495 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 186 IPR002130 GO:0000413|GO:0003755
Lele02g1495 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 199 214 IPR002130 GO:0000413|GO:0003755
Lele02g1495 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 198 IPR002130 GO:0000413|GO:0003755
Lele02g1495 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Lele02g1495 241 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 75 235 IPR002130 GO:0000413|GO:0003755
Lele02g1495 241 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 75 238 IPR002130 GO:0000413|GO:0003755
Lele02g1495 241 FunFam Peptidyl-prolyl cis-trans isomerase 67 240 - -
Lele02g1495 241 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 123 140 IPR020892 GO:0003755|GO:0006457
Lele02g1495 241 Gene3D - 59 240 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1495 Lele-ChrLele02 19127831 19130571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1495 86 218 U-box Gene Family AT5G67530 47.015 1.52e-28 111