Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1484 ATGAGAACTTCAGTTTAATCAGTCTTCAATGGCGGTGGAGGAATAGGGCGCAGAAAGCGCAAACGAGGGTATGGAAGAAGAAAACTCACCGTCAATGATAGAGTGGAGGTGAGGAGTATGGAAGATGGCTTTTTGGGTTCATGGCCCCCAGGGACTGTTGTCCAATGGGGAAAGCACAAACGTTATGTAAAATATGACCATGTTTTAGATGATAATGGGTCAAAATATCTTGTCGATATAGTGAATGTTTCAGCTATTTTGGATGGCGCCAGTTCCACAATTTACAATGAACGTGGACTTATTAGACCAATACCACCTTTGAAGGAGTTTGGGTCATGGGACCTTCTGTTTGGTCTATGTGTTGAGGCCTACTATCTTGAAGCTTCGTGGGAAGTTAAAGGGAAATGGGAGAGACGGGGCATGTGGGTGTTTCTTGAATTGGTTGAAGAGTTTGAACGGGATAACTATGTTGCAGTTTCATTAAAGCAAATCTGGTATGATGTGCGTGCCAAAGAATTGAAGACTGGACTTACAGAAGCACTAGAACCAGAGTCAGGTGAACCTACTGCTGATACTTACTTAAAACCGGAAAGAAATTCAGACAACTTTCATTCTGTTTCAAATTCTGATAATCAATTAACTAGCAACTCAAATGTTCTTTATGATGCCGGTCCTAGTAACGCATTTGTCCATGACATAAGTTTGGATGAGAACCATTTGGAAAAAGGTGACATGTCAAATTTCATGGATGCTGATCAAAACAGTGGTAGCATCATTCTTATCCAGGAGAAAAATGATTTGAAGACCATGGCGGACGGAATGTCAAATACGACTGTGGAGGCAGACATAGACATGTCCTTCCCTGAGAAGGAAGGATTGATGCAGAAGGAATCCATATCACCTGAAGAAGAGATCATACCAGATATTCCTGAAGAAATTTCTGGGCAGGATGCTGGTACTTCTGGTGAAGCAAATTACGGTACTGGGCTTTATAAAATAATTAGAAGACATGGGGAATTATCAACTTGCAGAGGGTTGACTGATTGGGGACCTCTGATACTTTCTGAAATTGAACTATGCCCTGATTCTGTTCATCAATACGTACTTGCATCTAATAGGAAGGCCAGGGAACAGCTGAAGACAAATTTCAGAAACTATATTGCATATCTTAGATGGAAAATTGAGTGGAGGCTACATAAAGGCAGTTATCAACAAGGGCGATATAGGTACACCTCACCTGAGATGCAGGGAAAACAGAGAAGGATGTATCCTACAATTGACAGTGATATTTCACATCTTGCAATTTTGCCACCTCCTTCTGTTGAAGACATAGTGGACCTGAATCTTGCCCCGAAACTGTTTTGA 1365 0.4139 MRTSVXSVFNGGGGIGRRKRKRGYGRRKLTVNDRVEVRSMEDGFLGSWPPGTVVQWGKHKRYVKYDHVLDDNGSKYLVDIVNVSAILDGASSTIYNERGLIRPIPPLKEFGSWDLLFGLCVEAYYLEASWEVKGKWERRGMWVFLELVEEFERDNYVAVSLKQIWYDVRAKELKTGLTEALEPESGEPTADTYLKPERNSDNFHSVSNSDNQLTSNSNVLYDAGPSNAFVHDISLDENHLEKGDMSNFMDADQNSGSIILIQEKNDLKTMADGMSNTTVEADIDMSFPEKEGLMQKESISPEEEIIPDIPEEISGQDAGTSGEANYGTGLYKIIRRHGELSTCRGLTDWGPLILSEIELCPDSVHQYVLASNRKAREQLKTNFRNYIAYLRWKIEWRLHKGSYQQGRYRYTSPEMQGKQRRMYPTIDSDISHLAILPPPSVEDIVDLNLAPKLF 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1484 454 MobiDBLite consensus disorder prediction 179 219 - -
Lele02g1484 454 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 28 131 - -
Lele02g1484 454 MobiDBLite consensus disorder prediction 195 219 - -
Lele02g1484 454 MobiDBLite consensus disorder prediction 1 20 - -
Lele02g1484 454 Pfam Agenet domain 32 106 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1484 Lele-ChrLele02 19039904 19042677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1484 38 169 PHD Transcription Factor Family AT5G58610 34.286 2.65e-24 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1484 02 19039904 19042677 Lele25g1685 25 24481171 24491055 CCT
Lele02g1484 02 19039904 19042677 Lele27g0403 27 3703462 3713054 CCT
Lele02g1484 02 19039904 19042677 Lele28g1687 28 19784625 19791341 CCT
Lele02g1484 02 19039904 19042677 Lele02g1484 02 19039904 19042677 ECH
Lele02g1484 02 19039904 19042677 Lele03g1226 03 7252443 7268149 hybridization
Lele02g1484 02 19039904 19042677 Lele04g1467 04 19885876 19896997 hybridization