LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g1483	ATGATTCCTCTGGATGTCTCAGGCATAAATGAAGAGAAAAATGGTCCGGTTGACGGTGATAAATTATCGTGCTATGTTTCCAAATTGCTTCGAAAGGAGCCTGAATTGTATGATGAAAACGGTGCACCAGTAAGTAGATCAATTGGGCAATGTAAGCCAAAACCCTTAAGGAAGCTAAAGTCCCAAGATAATCGGAGAAGGATGCATTCTACTATGGACGGTAATATCTCACTTCCTACAATTTTGCCACCTTCTTCTGTTGAAGATGTGATTGAGCCTGAATTTTGTCCTGAAGCTGTTTTGAGATATTACTTATGTTCATCAGAGAAGAGCCCCAAGGATGTTAAAAACTGTATGATGCTAAAGGCAAGAAAACACCTGTCAGCAGAAGGATGGAATTTTGAGTATCCAACCATAAGAGGAAGGGGAATGATCTATATTTCACCACAAAATCTGCGTTTTGGGTCACTTCGAATAGCGTGTGGAGCACATATTAAAGAATGCCTTCCTGAGTGGTTTAGTTCTGGAGCGATGCCTCGAGATGGTTTGGGCATAAATGAAAAGAAAATGAGTCAGGTTGACAGTAATAAACTAATGTGCTATGTGTCCCAATTGCTTCAAAAGGAGCCTGAATTGTCTGATTTAAGCGGGGTACCAGAAAGCACATTAGCTGGGCATTGCAAGCTCAAACACTCCAGGAATCCAAAGTACAGGCCAGCTAAGCTCCAGAAAAAAAGATTATCTATTCGGTTACAAAGATCAAGCAAAATGGTGCAGAAGGTGTGTGCTCCTTGTCCATCACACCAGAAAGCTCAAAATGTCCTGTCCGGGTTAATAGACTGCGATGTGTTGTTACCAAGGTCTAAGATCCACTACCGGGCAAGAGGAACGGGTCATTCTATGGGTGAGGGGCGAATAACTCGTGATGGAATCAAGTGTAGCTGTTGTCAGAAGCTATATAGTCTTGGTGGCTTTGAAGGCCATGCAACTGGTCGTCATAATTGCAGGTCAGCAGCTGCTAATATTGTTTTGGAAAATGGCAAGTCACTCCTGGATTTCCAGATGCAGATAATGAATGAGCATAGTACAAGAGGAACTACGAAAACACCATCGAGAAGTGTATATCAAGAAGAGAATGATGGAATTTGTTCTGTTTGGGACTGGTTTTGCCCATCTTCTTATTGTGGAATTTGTCGCCAAAGTAAAACTGAAGGGGCTGATGATGAAAAACTTTTGACTTGCAGTCAGTGTGAACATAAATATCATGGCAAGTGCTTGGGGAAAAGGGTCTATGGAGAGAAGGTAGCAGAAGTACCTCTTTTTGGAACCAGATTTCAGTATCGTGGCCTTGGAATGTGTCGCATATTAATGGATGAGCTTGAAAAGTCGAATCTTGCAATAGTAATGAATGATATTGAAAGGGGTTGTTCAGCTATGATGTTGCCTACAATGAAACTTTTGTCCAAGCCTCGCCCAGCTTTGGTTTTGTCAACAGTATCTGACAATGTTATTTTTGGCAGTGCTTTTGCTGGCAACGATGATCGTCTTGGTAGTGTTGCCTCTAGTCCAATTGTTTTGGCGAAGCCTGCGAATTCCGAGGGTGAACAATTGCAGAACGGAAGCATTCCAGAATGCTCACTTGAAGATGGCCGCTTAAAACATGTTTCCACCTGTAATGCTGAATGTAAGTACTACAAGAGAAGGAAAATCAGCATGAAAATATATGAATTCTCAGTCAAAAGAAGGTAG	1749	0.418	MIPLDVSGINEEKNGPVDGDKLSCYVSKLLRKEPELYDENGAPVSRSIGQCKPKPLRKLKSQDNRRRMHSTMDGNISLPTILPPSSVEDVIEPEFCPEAVLRYYLCSSEKSPKDVKNCMMLKARKHLSAEGWNFEYPTIRGRGMIYISPQNLRFGSLRIACGAHIKECLPEWFSSGAMPRDGLGINEKKMSQVDSNKLMCYVSQLLQKEPELSDLSGVPESTLAGHCKLKHSRNPKYRPAKLQKKRLSIRLQRSSKMVQKVCAPCPSHQKAQNVLSGLIDCDVLLPRSKIHYRARGTGHSMGEGRITRDGIKCSCCQKLYSLGGFEGHATGRHNCRSAAANIVLENGKSLLDFQMQIMNEHSTRGTTKTPSRSVYQEENDGICSVWDWFCPSSYCGICRQSKTEGADDEKLLTCSQCEHKYHGKCLGKRVYGEKVAEVPLFGTRFQYRGLGMCRILMDELEKSNLAIVMNDIERGCSAMMLPTMKLLSKPRPALVLSTVSDNVIFGSAFAGNDDRLGSVASSPIVLAKPANSEGEQLQNGSIPECSLEDGRLKHVSTCNAECKYYKRRKISMKIYEFSVKRR	582

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g1483	582	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	392	440	IPR013083	-
	Lele02g1483	582	Pfam	Tify domain binding domain	304	356	IPR032308	-
	Lele02g1483	582	PANTHER	PHD FINGER PROTEIN 12	429	463	IPR042163	GO:0003714\|GO:0045892
	Lele02g1483	582	SMART	PHD_3	394	446	IPR001965	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g1483	Lele-ChrLele02	19035108	19039683	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g1483	429	462	PHD Transcription Factor Family	AT5G58610	64.706	8.79e-08	53.5

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