Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1474 ATGTCCACCACTCAACCTACTGACTCACACACCAACCCTCTCACGCAAATGCTTCAGAGCATCTTCTCTGACAATAGCAACATCATGCTCGCCGCCATCATTTCCCTCCTTCTCGTCATCCTCTTCGTCCTCCTCCTCCATCTCTATGCCAAATGGTTCCTAGCCCATGCTCACGCCCAAGCCCAAGCCCGTCGCCGCCGCCGCACTGCCTCCGTCACCGTCTCCGACATCATTGGTCCAGCCCGGTTTCACCACTTCCATAGCTTCAATCTACAAGACTCCCCCATTTCCAGCTCCCCCAGTAAAGGGCTGGATTCGGTATCCATTGCTGCGATTCCTGTATTCTTATACGAAGCAGAGTCGACAGAGGACGAAGAAGGTGATGATCGAGAGTTGGAATGCGTAATTTGCTTGAGCGTTTTCGAGGATGGAGAAAGCGGCCGGAGCTTACCCAAGTGTGGTCATGCCTTTCATGTCGAGTGTATCGATATGTGGTTGAGCTCGCATTCGAATTGCCCAATCTGCAGGGCTCCGATTGTGGAGCATGATTCTCAATTGTTGGGTTCTGTTCATGATCAGGATGATTCCTCTGCTGTGCTTGAGATTGTGACTAATTCTCCGAGTTCTGAGATCAGCGAGAACGACCGTGGAACTGAGAGTATTATTAGCACTACTAACAATGATAATGATAACAATGGAGGGGTAAGTAGTGACTCAGCTATTTCCATATCAGAAACTTCATCCTCATTGTTGGGTTGTTCATTGAAGAGGATGTTCAGTAAAGTTTTTCCTTCTTCCAATGTTAATGATGAGTTAAGCACATGA 825 0.4824 MSTTQPTDSHTNPLTQMLQSIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAHAHAQAQARRRRRTASVTVSDIIGPARFHHFHSFNLQDSPISSSPSKGLDSVSIAAIPVFLYEAESTEDEEGDDRELECVICLSVFEDGESGRSLPKCGHAFHVECIDMWLSSHSNCPICRAPIVEHDSQLLGSVHDQDDSSAVLEIVTNSPSSEISENDRGTESIISTTNNDNDNNGGVSSDSAISISETSSSLLGCSLKRMFSKVFPSSNVNDELST 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1474 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 10 223 - -
Lele02g1474 274 Pfam Ring finger domain 133 176 IPR001841 -
Lele02g1474 274 CDD RING-H2_EL5_like 133 176 - -
Lele02g1474 274 SMART ring_2 134 175 IPR001841 -
Lele02g1474 274 MobiDBLite consensus disorder prediction 205 239 - -
Lele02g1474 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 181 IPR013083 -
Lele02g1474 274 FunFam RING-H2 finger protein ATL1 91 181 - -
Lele02g1474 274 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Lele02g1474 274 SUPERFAMILY RING/U-box 113 182 - -
Lele02g1474 274 SMART FANCL_C_2 130 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1474 Lele-ChrLele02 18949514 18950338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1474 22 177 Rapid Response to Elicitors AT3G16720 38.462 9.93e-31 114