Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1473 ATGGAGTTCATAATTCGAAACTATGATGGGCAATCTGACAAAGCGCAAGTGGAAGACATCGAGAGAAGATGCGCGATAGGCCCATCAGGAAGCGTGTTCCTCTTCACGGACACTATGGGTGACCCCATGTGCAGGATTCGAAACTGTCCCATGTACTACATGCTGGTCGCAGAGATGGACAAGGAGTTAATTGGGGTCATTCAAGGCTCTATAAAAGTGGTCACACTTGCAGCCCATGACTTGGCCAAGGTGGGCTATGTGATGGGGTTAAGGGTGGCTCCAAATCATCGGCGAAAAGGGGTGGGATCGAGCTTAGTACGAAGGCTAGAAGAATGGTTCTGTTCCAAGGACGTGGACTACGCATATATGGCCACAATGAAAGATAACCATGCTTCTATCAGCTTCTTCATGGGCAAGTTTGGTTACACCAAGTTTAGAACTCCGTCAATACTTGTAAACCCAGTGAACCCTGATCATCCCTTGAGGATCTCATCCAACATTGAGATTCTCAGGCTCAAGGTTGATCAAGCTGAATCACTTTACAGGAACTTCATGGGATCTTCTGAGTTCTTTCCTTATGACATAGACTGTATACTTAGGAACAAGCTAACTCTGGGGACATGGGTAGCTTATTTTAAAGGGGATAGTTCATGGGATGATTTTGGAAATGATGGTCGAGTTCCTAGTAACTGGGCTATGCTTAGTGTATGGAACAGTGGGAAAATCTTTAATCTGAGGTTAAAGGAAGCAACTTTTTCTTGCTTGTTATGTAGAAAGAGTCAGATTTTGATTGATAAGTTGTTTCCGTGCTTGAAAAGGCGGCCTACTTTGCCTGATTTCTTGAACCCATTTGGGTTTTACTTCATGTATGGGTTGTGTCATGATGGGCCATTGTCTGGGAATCTTGTGAGAGGTTTGTGCAAGTTTGTGCACAACATGGCTGCAGAGTCTGAGGATTGTCAGAACATTAAGGTTGTTGTGAGTGAAGTTGGAGGAGGAAGAGATAAGATAAAGCATCATATCCCACATTGGAAATTGCTGTCTTGCCAGCAGGAGGATTTGTGGTGTATAAAGGCCTTGAAAAATATTGATGGGGCAAACAAGTTTCATGAATTGACCAAAATCCCACCAAGAAGGCCTCTTTTTGTAGATCCAAGGGAGGTTTAA 1167 0.4387 MEFIIRNYDGQSDKAQVEDIERRCAIGPSGSVFLFTDTMGDPMCRIRNCPMYYMLVAEMDKELIGVIQGSIKVVTLAAHDLAKVGYVMGLRVAPNHRRKGVGSSLVRRLEEWFCSKDVDYAYMATMKDNHASISFFMGKFGYTKFRTPSILVNPVNPDHPLRISSNIEILRLKVDQAESLYRNFMGSSEFFPYDIDCILRNKLTLGTWVAYFKGDSSWDDFGNDGRVPSNWAMLSVWNSGKIFNLRLKEATFSCLLCRKSQILIDKLFPCLKRRPTLPDFLNPFGFYFMYGLCHDGPLSGNLVRGLCKFVHNMAAESEDCQNIKVVVSEVGGGRDKIKHHIPHWKLLSCQQEDLWCIKALKNIDGANKFHELTKIPPRRPLFVDPREV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1473 388 Pfam Acetyltransferase (GNAT) family 44 142 IPR000182 GO:0016747
Lele02g1473 388 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 145 IPR016181 -
Lele02g1473 388 CDD NAT_SF 54 122 - -
Lele02g1473 388 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 388 - -
Lele02g1473 388 Gene3D - 12 148 - -
Lele02g1473 388 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 3 162 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1473 Lele-ChrLele02 18944991 18946265 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele02g1473 Acetyltransf_1 4.8e-16 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1473 02 18944991 18946265 Lele04g1456 04 19790721 19791999 hybridization