Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1470 ATGGATAACGGAAAATGCAGCAAAATCCGATGCATTGTTAGGCTGCGTCAGATGCTGCGACGGTGGCGTAACAAGGCCCGCATGTCGTCGGCGAACGGCGTTCCGTCGGATGTCCCGCCTGGCCACTTGGCAGTCCGGGTCGGCAGAGACTGTCCCCGGAGGTATGTCGTGAAGGCCACCTATCTGAATCACCCCTTCTTCAAGAAGCTGCTGAATCAAGTTGAGGAAGAGTTTGGCTTTTCCAACACCGGACCGCTCTCTATCCCGTGCAACGACGAAACTTTCCTAGAGGTTCTCCGGTTTGTTTCCCGGTCGGACTCGGGCAAATCGGCCCGGTTCCGTAACCTCGACGAGTTACATAGGTATTGCCATGAGGGTTTGAGGAACAACCGGGGAGTCTGGCAAGAATGTCGACCGCTGCTTCATGGGTTTACTTCTGCTCAATGA 447 0.5503 MDNGKCSKIRCIVRLRQMLRRWRNKARMSSANGVPSDVPPGHLAVRVGRDCPRRYVVKATYLNHPFFKKLLNQVEEEFGFSNTGPLSIPCNDETFLEVLRFVSRSDSGKSARFRNLDELHRYCHEGLRNNRGVWQECRPLLHGFTSAQ 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1470 148 Pfam Auxin responsive protein 14 101 IPR003676 GO:0009733
Lele02g1470 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1470 Lele-ChrLele02 18916880 18917326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1470 4 145 Calmodulin-binding Proteins AT4G34750 47.973 1.98e-41 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1470 02 18916880 18917326 Lele02g1470 02 18916880 18917326 ECH
Lele02g1470 02 18916880 18917326 Lele03g1215 03 7162554 7165014 hybridization