Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1469 ATGGACCGTCGCTGGCCCTGGAAGAAAAAATCGGATAAGACAGTGCTTGAGAAAGCAGCTGCTGCATTGGACTCTGCTGGTGCCGGTGGTGGTGCTGCTGCTCAGGGCAGTCAGGATAATTACAAGAAGCCAAACTATGTGCAAATTTCTGTGGAGTCATATTCACATCTGAGTAGCTTGGAGGACCAAGTGAAGACATTTGAGGAAAAAGTTCAGACACTGGAAGACGAGGTCGAAGAATTGAGTGAAAAGCTTTCAGTGGCAAACTCAGAGATAACTACCAAGGAAAGCTTAGTAAAACAACATGCTAAAGTAGCTGAAGAAGCTGTCTCAGGCTGGGAAAAGGCAGAATCAGAAGCTTTGGCATTGAAGAATCATCTAGAATCTGTCACACTCTCAAAGCTCACTGCTGAGGATCGGGCATCGCATTTAGATGGCGCTCTTAAAGAGTGCATGCGACAGATAAGAAACCTGAAGGAAGAACACGAGCAGAAGATACAGGAAGTTGCTCTCACCAAAACCAAGCAATTAGATAAAATAAAGGGTGAGCTTGACGCAAAGATAGTTAACTTAGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCTCTTTCAAGGTCTTTACAGGAGCGCTCAAACATGCTAATCAAAATTAGCGAAGAAAAGGCTCAGGCTGAAGCTGATATCGAACTTTTGAAGGGAAACATAGAATCATGTGAAAGGGAAATCAATTCACTAAAGTATGAACTTCATGTTGTTTCTAAGGAGCTGGAAATTCGTAATGAAGAAAAGAACATGAGTATGAGATCTGCAGAAGCTGCTAACAGGCACCATGCAGAGGGTGTTAAAAAAATTGCAAAGTTAGAGGCTGAGTGCCAACGATTACGAGGTCTGGTGCGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTGGAAGTTGAGAATCTTGGTCGAGACTTTGGAGACACTCGATCAAGGAGGTCTTCTGTTAAGCCTACTAGTCCTCATTTGTCCCCATCACCCGATTTCTCCCTCGAGAATATTCAGAAATTTCAGAAGGAGAATGAATTTCTTACAGAGCGTTTATTGACAATGGAAGAAGAAACAAAGATGCTCAAAGAAGCTTTGGCAAAACGAAACAGTGAATTGCAGGCCTCAAGGAGCATGTGTGCTAAAACTCTGAGCAAACTTCAAAGTTTGGAAGCACAACTTCAGCCAATTGACCAGCATAAAGGATCGCCAAAATCCATCATCCAGATAACCCATGAAAGTATTTATGGTCAAAATGCAAGCATTGCACCAAGCTTAACCTCCATGTCTGAAGATGGAAACAATGATGTCGGAAAATGTGCTGAGTCTTGGTCTACAACATCGATCTCAGAATTATCCCAATCCCAAAAAGAGAGGAATATTGAGAAATCAATCATATCTGAGGCCTCTAATAAGTTGGAACTGATGGATGACTTTCTGGAGGTGGAGAAGTTGGCCTGTCTATCAAATGATTCCAATGGCTCTATTTCAATGTCTTCAAGCAATACAACTGAAATTGTGATCAACCATGTATCAGAAGTCAGTACTTGCATTGACGGTTCCTCTGAAAAGCGGAGTTATTTGAATCCATTACCCAATCAAGTGTCTTCTGGTGAAGTGTTGTCAGCCCCTGATGCCCAAGCTGATGTTAATCACTTGTCACTGACCGAGCTTAGATCAAGAATTTTGACGGTTTTTGAGTCCATGTCTAGCAATGCTGATATAGGAAATATCCTTGAAGATATTAAACATATTTTGGAAGATGCACGTGATGCTTCCAACAACCATTCTGTTGAATGCGTACCCCAGGATGTCCATCCTTCTGGTGCTACATCTGACAGGCAAGTTAACCCGGAAGATGTTGGCTCACGTCTTGAAAAGGAAATCATTTCATCCAAGCAAACAATAGAACACATGCAGATGACCAGAGACTTGGAAGCTGCAATATCTCATATTCACGACTTTGTGCTGTTCCTAGGTAGAGAAGCAATGTCAGTTCATGACATTTCTGCTGATGGAGGAGTGAAGATAAAGATAGAGGAATTTTCTCTCACCTTTAATAAAGTCATATGCAATGAAGCAACTTTGCTGCAGTTTGTTATTGATTTGTCATGTGTATTAGCCAAGGCGAGTGAATTCAGATTTAATGTCCTTGGCTATAAGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATTGACAAGATTGCTTTGCCAGAAAATAAGTTAGTTCAAAACAGTCCTTCAGGAGAAAGATATCCAAATGGCTGTTCCCATATTCTTAATCCTTGTGCTGATCCTCAGGTACCTGATGATGGAAATTTGATCTCTACCTATGAATCAAATGGTACTTCACACCAATTCTCAGTCGATAAGTTTGAAGAATTGAAATTAGAGAAAGAGAAGACTGCAATGGATCTGGCAAGATGCACTGAAACTCTTGAATCGACAAAGTCTCAATTACAAGAGACTGAGCAACTTTTGGCAGAAGTAAAATCACAACTGGCTGCTTCTCAAAGATCAAACAGCTTGTCTGAGACGCAGCTGAAATGCATGGCAGAGTCATACAGGACCCTTGAAACACGTGCGCAGGAGTTAGAAACCGAGCTGAATCTTCAGCGAGTTAAGACAGAAACTCTGGAGTGTGAACTTAAAGATGAAAAGAGGGATCGTGAAGATGCTGTGGCCAAGTGTAAGGACCTAGAAGAGCAATTGCAAAGGTATGAGAGTTCAGCAGCTGATAATGACATCAAGACTAAGCAGGAGAGAGATTTGGCGGCTGCGGCAGAGAAGCTAGCCGAGTGTCAGGAAACAATATTTCTTTTGGGCAAGCAGCTACAAACTCTACGCCCTCAAAGGGAGCAAGGTGGATCTCCTTACAGCGAGAGAAGTTCAAAGGTTGATGAAGGGCTTACGGAGGAGGAGCCTACTATTAGTAACCCAAATTTGCAAGAGTTAGATGATACGGACAGTGCTAGTTCAGCATTTGTGCAAAGATTGGGTCCAGAGTCACCCTTGTATTTCTCCAACAGCCTTTGTCCATCTGACAATGAAGCAAACCTTGCCACCATATCTCCAGCTAAGAATCCCAAGCACAGGCCCACTAAATCAGCCTCCTCCTCCGTTTCTTCCGCTCCCACGCCAGAGAAACTCGCGCATGCACATGGGCGAGGATTTAGTAGATTCTTTTCATCAAAAGGAAAAAATGGGAGCTAA 3258 0.4269 MDRRWPWKKKSDKTVLEKAAAALDSAGAGGGAAAQGSQDNYKKPNYVQISVESYSHLSSLEDQVKTFEEKVQTLEDEVEELSEKLSVANSEITTKESLVKQHAKVAEEAVSGWEKAESEALALKNHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALTKTKQLDKIKGELDAKIVNLEQELLRSAAENGALSRSLQERSNMLIKISEEKAQAEADIELLKGNIESCEREINSLKYELHVVSKELEIRNEEKNMSMRSAEAANRHHAEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDFGDTRSRRSSVKPTSPHLSPSPDFSLENIQKFQKENEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQPIDQHKGSPKSIIQITHESIYGQNASIAPSLTSMSEDGNNDVGKCAESWSTTSISELSQSQKERNIEKSIISEASNKLELMDDFLEVEKLACLSNDSNGSISMSSSNTTEIVINHVSEVSTCIDGSSEKRSYLNPLPNQVSSGEVLSAPDAQADVNHLSLTELRSRILTVFESMSSNADIGNILEDIKHILEDARDASNNHSVECVPQDVHPSGATSDRQVNPEDVGSRLEKEIISSKQTIEHMQMTRDLEAAISHIHDFVLFLGREAMSVHDISADGGVKIKIEEFSLTFNKVICNEATLLQFVIDLSCVLAKASEFRFNVLGYKGTEAETNSPDCIDKIALPENKLVQNSPSGERYPNGCSHILNPCADPQVPDDGNLISTYESNGTSHQFSVDKFEELKLEKEKTAMDLARCTETLESTKSQLQETEQLLAEVKSQLAASQRSNSLSETQLKCMAESYRTLETRAQELETELNLQRVKTETLECELKDEKRDREDAVAKCKDLEEQLQRYESSAADNDIKTKQERDLAAAAEKLAECQETIFLLGKQLQTLRPQREQGGSPYSERSSKVDEGLTEEEPTISNPNLQELDDTDSASSAFVQRLGPESPLYFSNSLCPSDNEANLATISPAKNPKHRPTKSASSSVSSAPTPEKLAHAHGRGFSRFFSSKGKNGS 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1469 1085 Coils Coil 57 91 - -
Lele02g1469 1085 Coils Coil 821 855 - -
Lele02g1469 1085 Coils Coil 863 952 - -
Lele02g1469 1085 MobiDBLite consensus disorder prediction 964 1002 - -
Lele02g1469 1085 MobiDBLite consensus disorder prediction 324 346 - -
Lele02g1469 1085 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1080 - -
Lele02g1469 1085 Coils Coil 352 379 - -
Lele02g1469 1085 Coils Coil 141 175 - -
Lele02g1469 1085 MobiDBLite consensus disorder prediction 1032 1061 - -
Lele02g1469 1085 Coils Coil 181 201 - -
Lele02g1469 1085 Pfam Filament-like plant protein, long coiled-coil 95 969 IPR008587 -
Lele02g1469 1085 Coils Coil 216 275 - -
Lele02g1469 1085 MobiDBLite consensus disorder prediction 1032 1085 - -
Lele02g1469 1085 MobiDBLite consensus disorder prediction 331 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1469 Lele-ChrLele02 18899628 18903594 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0080 25 464926 469307 Lele02g1469 02 18899628 18903594 CCT
Lele26g0091 26 489035 493917 Lele02g1469 02 18899628 18903594 CCT
Lele27g2006 27 24243492 24248329 Lele02g1469 02 18899628 18903594 CCT
Lele28g0090 28 497956 509370 Lele02g1469 02 18899628 18903594 CCT
Lele02g1469 02 18899628 18903594 Lele02g1469 02 18899628 18903594 ECH
Lele02g1469 02 18899628 18903594 Lele03g1214 03 7145268 7149235 hybridization
Lele02g1469 02 18899628 18903594 Lele04g1452 04 19747213 19752857 hybridization