Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1468 ATGTCTCTGAGAAGTATCTGCAAAGAGAAAATGGGACTCCGAAACACAAGGAGGGTTGCATCAGAGAGAACGGTGATGAAGGAAATAGTGAAGAAATGGTCAAGTAAGAAGAAGGAAGAAGAAGAAGAGGGTTTTCCAATGGACGTTCCAAAGGGTCATTTTGTGGTTTATGTCGGAGAGAAGAGAATCAGATACATTGTGCCTATTTGGTTTCTGAGACGCCCCGAGTTTCAGAGGTTACTCCATGAAGCAGCTCAAGAGTTTGGGTTTTGCCATCAAATGGGTCTCACGATTCCTTGCCAACAACATGTTTTTGAGTCTCTTGTAACTAAATTGCTCCGACCATGA 348 0.431 MSLRSICKEKMGLRNTRRVASERTVMKEIVKKWSSKKKEEEEEGFPMDVPKGHFVVYVGEKRIRYIVPIWFLRRPEFQRLLHEAAQEFGFCHQMGLTIPCQQHVFESLVTKLLRP 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1468 115 Pfam Auxin responsive protein 33 110 IPR003676 GO:0009733
Lele02g1468 115 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1468 Lele-ChrLele02 18893712 18894059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1468 26 114 Calmodulin-binding Proteins AT4G34750 38.889 4.36e-18 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1468 02 18893712 18894059 Lele02g1468 02 18893712 18894059 ECH
Lele02g1468 02 18893712 18894059 Lele03g1213 03 7140529 7140900 hybridization
Lele02g1468 02 18893712 18894059 Lele04g1451 04 19742767 19743120 hybridization