Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1465 ATGGCAAATAAGGAAGATCAACCCGTCAAGTCAAGGTTCCGACGCATCTGCGTCTTCTGTGGTAGCAGCCCCGGCAAGAACCCCAGCTACCGGCTCGCCGCTATTCAACTCGCCAAACAACTCGTGGAGAGAAAGATTGATTTGGTTTATGGAGGAGGCAGCATCGGGTTGATGGGTCTCGTCTCTCAAGCCGTCTTCAACGGTGGTCGCCACGTGTTAGGAGTGATTCCCAAGAGTCTTATGCCAAGAGAGATCACCGGAGAGACAGTAGGCGAAGTTCGAGCCGTATCCGGGATGCACCAGCGTAAGGCCGAGATGGCTCGACAAGCCGACGCTTTCATCGCCCTCCCAGGAGGTTATGGTACTCTTGAAGAGCTATTGGAAGTGATAACCTGGGCTCAACTGGGAATTCACGATAAACCAGTGGGCTTGTTGAACGTAGATGGGTATTACAACTCATTGCTGTCATTCATAGATAAAGCTGTGGACGAAGGCTTCGTGACCCCTGCTGCCCGTCACATCATCGTCTCTGCCCAAACTGCCCAAGAACTCATGTGCAAGCTTGAGGAATACCAGCCGAAGCACCGTGATGAGACCGCCAAGCTTAGCTGGGAGATGGAACAACACCTGGTTCACTCTCAAACCGCCATGTCCGACATTTACCGTTGA 669 0.5262 MANKEDQPVKSRFRRICVFCGSSPGKNPSYRLAAIQLAKQLVERKIDLVYGGGSIGLMGLVSQAVFNGGRHVLGVIPKSLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFVTPAARHIIVSAQTAQELMCKLEEYQPKHRDETAKLSWEMEQHLVHSQTAMSDIYR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1465 222 Pfam Possible lysine decarboxylase 58 187 IPR031100 -
Lele02g1465 222 TIGRFAM TIGR00730: TIGR00730 family protein 15 191 IPR005269 GO:0009691|GO:0016787
Lele02g1465 222 FunFam CASP-like protein 4 190 - -
Lele02g1465 222 PANTHER LOG FAMILY PROTEIN YJL055W 7 211 - -
Lele02g1465 222 Gene3D - 3 190 - -
Lele02g1465 222 SUPERFAMILY MCP/YpsA-like 12 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1465 Lele-ChrLele02 18856963 18858432 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0077 25 447570 449707 Lele02g1465 02 18856963 18858432 CCT
Lele27g2009 27 24264510 24266171 Lele02g1465 02 18856963 18858432 CCT
Lele02g1465 02 18856963 18858432 Lele02g1465 02 18856963 18858432 ECH
Lele02g1465 02 18856963 18858432 Lele03g1210 03 7104574 7106047 hybridization
Lele02g1465 02 18856963 18858432 Lele04g1448 04 19702650 19704117 hybridization