Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1460 ATGGGCTGGCTTTGCAGGAAGTTGAAAATTGGGAATAAGAACTGCTCTCTGCAGCCTTTAATCGGGTGTAGCTACGGTTGTCTTTTTCAAGTGGAGATTGGACCTGACGGCCCTTTGTTGGCTCGGGTTACTCCTTCAGTCCAAGGTAATGATACTGAAGAGAAAGGGGGCAATCAATCAAACGTTGAGTCTAGGGACAACCGGACATTGATTGATAATAACAAAGCCCAAAGCCTGACTGGCGAAGATATACAAGCTATGAAGAGTCAGGGTGCCAGAGGTGATGAAATTATTGAGGCTCTCATTGCCAATAGTGCTACATTTGAAAAGAAAACAGCTTTTTCACAGGAGAAATATAGACTTAGGAAGCAAAAGAAATATGCACCAAAAGTATTACTGAGGCGTCCTGTTGCTCGAAGGTTCATGCGTGTGGATACATTATCTTTTGTACTCTCGATGGCTAATGTCTCTTCCCACTCAGACATTCTTGTTGTTGATATGGTTGGTGGCCTTCTTACTGGTGCTGCGGCAGAACGTTTAGGAGGTACAGGTTTTGTATGCAACTCATATCTAGGAACAGCACCATATTCCATGGATATTGTGAGGATATTTAACTTTAGTGAAGAAATTTGCAAGAGAATTGTCCGGTCTCCCATTTCTGACTTGCTGTCACAAAAAGAATCTCCTGAACAAATTCTACATCGTAACATGGAAAGCCTGACAGATAATCAAATGTCTACATCGGTCAGTGTGGATGAAATCTCTGATCCATCAGGAAATGAAATTTCTGATCAAGGTGCTGAGAATGTTGAGAATACCAATATTCCTGCTAAAAGAGCGTGCAAATCTGCAAAGGCTGGAGAAAGAGCACAACAGGAAACCATTAATTTGTGGAAAGAAAATGGTTTTTCTAGCTTAATTATCGCCGCACCAGATTTGGATACCTGGACATTGGTTAGAGATCTCTTGCCCCTCTTATCAAATTCGGCTCCCTTTGCTATTTATCATCAATATCTTCAGCCGCTCGCAACTTGCATGCATAATCTACAGGTTGGGAAAATGGCCATTGGCTTGCAAATATCAGAGCCTTGGTTACGTGAATACCAGGTCCTTCCATCAAGAACTCACCCGTGCATGCAAATGAGCGCATTTGGTGGATATATTCTTAGCGGGACTAAGATTTGCAGCAGCAGCTAA 1197 0.4244 MGWLCRKLKIGNKNCSLQPLIGCSYGCLFQVEIGPDGPLLARVTPSVQGNDTEEKGGNQSNVESRDNRTLIDNNKAQSLTGEDIQAMKSQGARGDEIIEALIANSATFEKKTAFSQEKYRLRKQKKYAPKVLLRRPVARRFMRVDTLSFVLSMANVSSHSDILVVDMVGGLLTGAAAERLGGTGFVCNSYLGTAPYSMDIVRIFNFSEEICKRIVRSPISDLLSQKESPEQILHRNMESLTDNQMSTSVSVDEISDPSGNEISDQGAENVENTNIPAKRACKSAKAGERAQQETINLWKENGFSSLIIAAPDLDTWTLVRDLLPLLSNSAPFAIYHQYLQPLATCMHNLQVGKMAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGTKICSSS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1460 398 MobiDBLite consensus disorder prediction 250 271 - -
Lele02g1460 398 Pfam Gcd10p family 48 136 IPR017423 GO:0030488|GO:0031515
Lele02g1460 398 Pfam Gcd10p family 142 227 IPR017423 GO:0030488|GO:0031515
Lele02g1460 398 PANTHER TRANSLATION INITIATION FACTOR EIF3-RELATED 6 397 IPR017423 GO:0030488|GO:0031515
Lele02g1460 398 MobiDBLite consensus disorder prediction 45 70 - -
Lele02g1460 398 MobiDBLite consensus disorder prediction 43 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1460 Lele-ChrLele02 18820128 18824907 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1460 02 18820128 18824907 Lele02g1460 02 18820128 18824907 ECH
Lele02g1460 02 18820128 18824907 Lele03g1206 03 7082601 7088127 hybridization
Lele02g1460 02 18820128 18824907 Lele04g1443 04 19675616 19680580 hybridization