Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1432 ATGGTTGCTTATAATACAAGTGGTAGCAAGAAAATGAAGAAAGCAACGGTTCTTTTGGGCAGCCTTGTGGTATTATGGTATGTCACAATAACTGCTTCTGCCTTCTCAACTTCTGGATGGACTCAAGGACATGCCACTTTCTATGGAGGTAGCGATGCCTCGGGAACGATGGGAGGAGCTTGTGGGTATGGGAATCTGTATTCGACAGGGTATGGGACAAGAACTGCAGCTTTAAGCACAGCTTTATTCAATGATGGGGCTTCTTGTGGGCAATGCTACAAAATCATATGCGATTATAAGACAGACCCGAGATGGTGTTTGAGAGGAAGATCTATAACTATAACTGCCACTAACTTCTGCCCTCCTAATTTTGCCCTTCCCAACAACAATGGAGGTTGGTGCAACCCACCTCTGAAACACTTCGACATGGCTCAACCCGCTTGGGAAAAGATCGGTATTTACAGAGGAGGCATCATCCCCGTCTTGTTCCAAAGGGTTCCATGTAAGAAGCACGGAGGTGTTAGGTTTACTGTGAATGGAAGAGATTACTTTGAGCTGGTAATGATAAGTAATGTGGCTGGCGCTGGTTCCATTTCTTCTGTTTCAATCAAAGGCTCGAAGACTGGTTGGATGGCTATGTCCAGAAACTGGGGAGCTAATTGGCAATCCAATGCATATTTAAATGGTCAATCTTTGTCATTCAAGGTTACAACCGATGATGGAGAAACCAGAGTGTTCCCAGACGTGGTTCCTTCTTCTTGGACCTTTGGCCAGACATTCTCTAGCAAAATCCAGTTCTAA 801 0.4482 MVAYNTSGSKKMKKATVLLGSLVVLWYVTITASAFSTSGWTQGHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYKIICDYKTDPRWCLRGRSITITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIIPVLFQRVPCKKHGGVRFTVNGRDYFELVMISNVAGAGSISSVSIKGSKTGWMAMSRNWGANWQSNAYLNGQSLSFKVTTDDGETRVFPDVVPSSWTFGQTFSSKIQF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1432 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 58 173 IPR007112 -
Lele02g1432 266 SUPERFAMILY PHL pollen allergen 170 262 IPR036749 -
Lele02g1432 266 Gene3D - 173 266 IPR036749 -
Lele02g1432 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 183 262 IPR007117 -
Lele02g1432 266 Gene3D - 27 169 IPR036908 -
Lele02g1432 266 SUPERFAMILY Barwin-like endoglucanases 39 191 IPR036908 -
Lele02g1432 266 SMART dpbb_1 75 163 IPR007112 -
Lele02g1432 266 FunFam Expansin 29 169 - -
Lele02g1432 266 PRINTS Expansin signature 148 161 IPR002963 GO:0009664
Lele02g1432 266 PRINTS Expansin signature 70 84 IPR002963 GO:0009664
Lele02g1432 266 PRINTS Expansin signature 99 110 IPR002963 GO:0009664
Lele02g1432 266 PRINTS Expansin signature 219 240 IPR002963 GO:0009664
Lele02g1432 266 PRINTS Expansin signature 248 264 IPR002963 GO:0009664
Lele02g1432 266 PRINTS Expansin signature 172 184 IPR002963 GO:0009664
Lele02g1432 266 PRINTS Expansin signature 112 122 IPR002963 GO:0009664
Lele02g1432 266 PRINTS Expansin signature 184 205 IPR002963 GO:0009664
Lele02g1432 266 PRINTS Expansin signature 131 148 IPR002963 GO:0009664
Lele02g1432 266 PANTHER EXPANSIN-A15 21 263 IPR002963 GO:0009664
Lele02g1432 266 FunFam Expansin 173 266 - -
Lele02g1432 266 PRINTS Expansin/Lol pI family signature 156 172 IPR007118 GO:0005576
Lele02g1432 266 PRINTS Expansin/Lol pI family signature 248 262 IPR007118 GO:0005576
Lele02g1432 266 PRINTS Expansin/Lol pI family signature 79 97 IPR007118 GO:0005576
Lele02g1432 266 PRINTS Expansin/Lol pI family signature 210 224 IPR007118 GO:0005576
Lele02g1432 266 PRINTS Expansin/Lol pI family signature 39 54 IPR007118 GO:0005576
Lele02g1432 266 PRINTS Expansin/Lol pI family signature 57 75 IPR007118 GO:0005576
Lele02g1432 266 Pfam Expansin C-terminal domain 174 251 IPR007117 -
Lele02g1432 266 Pfam Lytic transglycolase 75 162 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1432 Lele-ChrLele02 18613839 18616389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1432 75 266 Expansin Gene Family AT1G20190 81.250 7.01e-121 341