Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1431 ATGAAAGATCACACAACTCCTTCGCATTCTGTTTCTTCAGCTGTACCGTCTACTTTGCAGCATTTAAAGGAGATAGCATCACTTATTGAGACCGGTTCGTACTCTAAGGAAGTTCGTAGAATTGCTCGTGCCGTTCGCCTTACAATTGCGTTGAGGCGCAAATTGACAGCATCGGTACTCTTATCCTTTATCGATTATGTTGCTTGCCCGGGTTCTGAAGCTCACGGCAGATTGTCTGCTTATCTTCCCGAGGAAGATAGTCATGAGATGGAAGTAGATACTGCTACATCTACTGTTCAATCCTCAGCTAAGCACTTATTGCCTGAGATGGAGATGTCTTGTTACTTGCTCATACTACTTTTTCTGATTGATCAGAAGAAATATAAGGAGGCCAAAGTTTGTTCCTCAGAAAGCATTGCCCGGGTCAGGAACCTTAACAGAAGAACTGTTGATGTTATTGCATCCAGATTGTACTTCTATTATTCATATATTTATGAACTCACAGGAGATCTTGCGGAAATTCGAGGTAACCTTCTTGCTTTGCACCGGATTGCTACCCTTCGCCATGATGAGCTTGGTCAGGAAACACTTCTTAATTTGTTGCTTCGTAACTACCTCCACTACAACCTATATGATCAGGCAGAGAAGTTGAGATCTAAGGCTCCACGATTTGAAGCACATTCAAACCAGCAGTTCTGTCGATATCTTTTCTACCTTGGGAAAATTCGGACAATTCAATTGGAGTACACTGATGCAAAAGAGTCTCTCCTGCAAGCTGCTCGAAAAGCTCCAGTTGCGGCACTTGGCTTTAGAATTCAGTGTAATAAGTGGGCTATAATAGTGCGTTTGCTCTTGGGAGAAATACCTGAGAGGACCATCTTCATGCAGAAAGGAATGGAGAAAGCTTTGAGGCCTTACTTTGAGCTTACAAATGCTGTTCGAATTGGAGACCTGGAGCTATTTAGGAATGTTGCAGATAAGTTTGCTGCTACTTTCAGTGCTGATGGAACTCATAATTTAATTGTTAGATTGCGTCATAATGTCATCAGGACTGGTTTACGAAACATTAGCATTTCTTATTCTCGTATCTCGCTCGCTGATGTGGCACAAAAATTAAGGCTAAACTCTGCAAACCCCATTGCAGATGCTGAGAGCATCATAGCCAAGGCCATTAGAGATGGTGCAATTGATGCTACATTGGAGCATGGTAATGGGTGGATGGTATCTAAGGAAACTGGAGATATATACTCCACTACTGAGCCTCAATTGGCTTTTAATTCTCGTATTGCTTTCTGCCTTAACATGCACAATGAGGCCATCCGGGCAATGCGTTTCCCACCAAACACACACAATGAGAAGGAAAGCGCCAAGAAGCGGAGAGAAAGGCAGCAGCAGGAGCAAGAACTAGCTAAGCACATTCAAGAGGAGGATGATGATGATTTCTGA 1446 0.4295 MKDHTTPSHSVSSAVPSTLQHLKEIASLIETGSYSKEVRRIARAVRLTIALRRKLTASVLLSFIDYVACPGSEAHGRLSAYLPEEDSHEMEVDTATSTVQSSAKHLLPEMEMSCYLLILLFLIDQKKYKEAKVCSSESIARVRNLNRRTVDVIASRLYFYYSYIYELTGDLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRIQCNKWAIIVRLLLGEIPERTIFMQKGMEKALRPYFELTNAVRIGDLELFRNVADKFAATFSADGTHNLIVRLRHNVIRTGLRNISISYSRISLADVAQKLRLNSANPIADAESIIAKAIRDGAIDATLEHGNGWMVSKETGDIYSTTEPQLAFNSRIAFCLNMHNEAIRAMRFPPNTHNEKESAKKRRERQQQEQELAKHIQEEDDDDF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1431 481 FunFam 26S proteasome non-ATPase regulatory subunit 3 114 437 - -
Lele02g1431 481 SUPERFAMILY "Winged helix" DNA-binding domain 340 416 IPR036390 -
Lele02g1431 481 SMART PINT_4 339 432 IPR000717 -
Lele02g1431 481 MobiDBLite consensus disorder prediction 443 481 - -
Lele02g1431 481 Pfam PCI domain 305 410 IPR000717 -
Lele02g1431 481 ProSiteProfiles PCI domain profile. 233 414 IPR000717 -
Lele02g1431 481 MobiDBLite consensus disorder prediction 447 474 - -
Lele02g1431 481 Pfam Proteasome regulatory subunit C-terminal 414 480 IPR013586 GO:0000502|GO:0030234|GO:0042176
Lele02g1431 481 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 339 432 - -
Lele02g1431 481 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 9 472 - -
Lele02g1431 481 Coils Coil 455 475 - -
Lele02g1431 481 Gene3D - 238 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1431 Lele-ChrLele02 18609247 18613340 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0050 25 306720 309991 Lele02g1431 02 18609247 18613340 CCT
Lele26g0061 26 335090 338293 Lele02g1431 02 18609247 18613340 CCT
Lele27g2036 27 24403034 24406313 Lele02g1431 02 18609247 18613340 CCT
Lele28g0060 28 332220 336525 Lele02g1431 02 18609247 18613340 CCT
Lele02g1431 02 18609247 18613340 Lele02g1431 02 18609247 18613340 ECH
Lele02g1431 02 18609247 18613340 Lele03g1178 03 6899671 6906376 hybridization
Lele02g1431 02 18609247 18613340 Lele04g1412 04 19471437 19475527 hybridization