Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1399 ATGGATTTTTCTCCCCCGTTTACCATATTAGAAGGCACTCAAGGTAGTTTCAACAAAGACAATGCATCCATCATGGAAGATGAGAAAGCCCAAGATTTGAACAAACTGAAACAAACAATTGGTAAACCTCCACGGAACCTCTCCCTCTTAAGACATAGCATCAGCTCCAACAGGTTGCAAGCTGCCACAGATTTGAGTTCTGATTCAGGGGTTGTTGGGAGTAAATCGTCTTCCGACGAGAAGGCAGAGTTTCAACCCATATATCGGTCAGGAAGTTGCGCTGAAATTGGACCGAAACAGTACATGGAAGATGAACACATCTGTGTTGATAATCTTATTGAGCAACTAGGTTCAGTTTCAGAAATTCCTTCTCATGGAGCTTTCTACGGGGTATTTGATGGTCATGGTGGGACTGATGCAGCTACATATATAAGAAATAACATCCTCAAATTTATAGTTGAGGACTCCCATTTTCCAACTTACCTAGAGAAGGCAATTAAAAGTGCCTTTCTGAAAGCTGATTATGCATTTGCAGATGCTAGTTCGCTTGACATCTCTTCTGGCACCACTGCTTTAACTGCACTTGTATTTGGAAGGAGCCTGATAGTTGCGAATGCCGGGGATTGCCGAGCCCTGCTACTATTGCACCCTTTGGCTACATTTCAGAAGAATGTTCTTTTAATTTGA 687 0.4236 MDFSPPFTILEGTQGSFNKDNASIMEDEKAQDLNKLKQTIGKPPRNLSLLRHSISSNRLQAATDLSSDSGVVGSKSSSDEKAEFQPIYRSGSCAEIGPKQYMEDEHICVDNLIEQLGSVSEIPSHGAFYGVFDGHGGTDAATYIRNNILKFIVEDSHFPTYLEKAIKSAFLKADYAFADASSLDISSGTTALTALVFGRSLIVANAGDCRALLLLHPLATFQKNVLLI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1399 228 SUPERFAMILY PP2C-like 84 214 IPR036457 -
Lele02g1399 228 CDD PP2Cc 88 214 IPR001932 -
Lele02g1399 228 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Lele02g1399 228 SMART PP2C_4 79 228 IPR001932 -
Lele02g1399 228 Pfam Protein phosphatase 2C 91 213 IPR001932 -
Lele02g1399 228 Gene3D - 79 221 IPR036457 -
Lele02g1399 228 ProSiteProfiles PPM-type phosphatase domain profile. 89 228 IPR001932 -
Lele02g1399 228 PANTHER PROTEIN PHOSPHATASE 2C 71 213 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1399 Lele-ChrLele02 18395906 18397691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1399 1 213 PP2C-type Phosphatase Gene Family AT2G33700 60.930 2.87e-82 248