Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1398 ATGCTTCTCTTGCAAGCCATGAATTTGCTTTGGGCTGTTTCTTGCGTGCTCGTGCTTTTCACAGTACCTCCATATGTGATCAGTAGTGGTAATTCGTCGAGACCGGCCGTGGTGCATATAGGCGCTCTCTTCACCTTTGATTCTACCATTGGCAAAGTCGCTAAAATCGCGTTGGAGGAAGCTGTGAAGGATGTCAACGCCAATGCTAGCATACTCCCAGGAAGTAAACTTGTCCTCACTGAGAAAAATTCCAATTGCAGTGGTTTCTTGGGCATGGTTCAAGGTAACATACTAATTAATTTCTTTTCTCGCGCTATTTTGCTTGTTGTTTCACATATTCAGTGTAAATTTTTTGTTGGAATTGCAAATTTGCGGTTCATGGAGACTGATGTGTCCTCTGTTGTCATTTGCAGCTACGGACCCAACACTATCCAACCTTCAGTTCCTTTTTTTGTGAGAACAGCGATGAGTGATTTGTACCAAATGGCTGCAGTTGCTGAAATTGTTGATTATTATGGTTGGAAGGAGGTCATTACTATTTTTATAGATGATGATTTTGGACGAAATGGCGTGTCAGCCTTGGATGATCAACTATCAGCTAGGCGCTGTAGAATCTCTTACAAGGCAGGAATTAGATCAGAACCTGTAGTTGATCGGAGTGAAATCACGGATTTGCTGGTGAAGGTGGCTCTAACGCAATCTCGGGTCATTGTTCTCCATGTAGATCCTGATTCAGGTTATGATTTTCAATGTTGCACAGTATCTTGGGATGACTGGGAATGGCTACATTCAATGAGTGTTCTTCAGGGCGTTCTTTTTTTACGCCAACATACTCCCGATTTAGATAGAAAAAAAGCATTTATGTCTAGGGGGAACAAGTTAACTGGAGGCTCTGTGGGGTTAAGTTCGTATGGCCTTCATGCATATGATACTGTTTGGGTGCTTGAACATGCTATTGATGCATTCTTCAACCAGGGTGGGATTATATCTTTTTCTAATGACTCCAGGATACATGATGTTGACGAAGGTAATCTTAATCTTGAGGCAATGGGCATTTTTGACAATGGAACGCTTCTGTTGAACAAAATATTGCAGAGCAACTTTGTTGGTTTAACAGGTCCCGCTGGTTTCTGGTCTAACTATTCTGGTCTGTCCATTGTACCTCCTGAGACATTGTATGCTAAGCCTCCTAATCGCTCGAGTGCAAACCAACACCTTCATTCTGTAATATGGCCTGGAGAAACACTATCAAAACCCCGTGGATGGGTTTTTTCAAATAATGGAAAACAATTGAGAATTGGTGTGCCTATCCGATTCAGTTACCGTGAATTTGAATTCCTCATTCAAGTAACTGATATGTTTAGAGGTTTCTGCATTGATATATTCACGGCAGCTCTAAACCTGTTACCATATGCTGTTCCCTATCTCTTTGTCCCATTTGGAGATGGCCGAAAAAACCCAAACTACGATGAACTTGTCAGGTTTAGCTTGTCAACTCTATTCTTCGCCCACAGAGAGAATACTATGAGTACTCTTGGTCGCATGGTGGTAATCATATGGCTGTTTGTGGTTTTGATAATCAATTCAAGCTACACGGCGAGTTTGACATCAATCCTCACAGTGCAGCCACTATCTTCTACTATCAAAGGAATAGACAGCTTAAAAGCTGGTGATGAACCTAGAGGGTATCAAGTGAGTTCATACGCAGAACATTATTTGGCCGACGATGTTGGAATATCCAAATCCAGGCTCGTTGACCTTGGATCTCCCGAAAAGTATGCCAAGGCTCTCCAGCTTGGTCCTGAAAATGGAGGTGTTGCTGCTATTGTTGACGAACGACCCTATGTTGAAATTTTCTTATCAACCCAATGCAGCTTCAGGATAGTAGTAGGTCAAGAGTTCACCAGAAGCGGCTGGGGATTTGCATTCCCACGGGACTCCCCTCTGGCCACTGACTTGTCCACTGCAATTCTACAACTTTCTGAAAATGGTGACCTGCCGCAGATTTATGATAAGTGGCTCGTAGGAAGAGCCTGCAGTACGGATTATACGGAAATTGATTCAGATCGGCTTCGGTTTAAAATCTTCTGGGATCTCTTTATTATATGTGGGATTGCTTGCATTGTTGCTCTTTGTATCTATTTTTGGCAGATTATGTTGCAGTTACGCCATTCTGCTCCTACTGCTCAACCATCTTCTTCCAATGGAAGCTCATCAGTTTCTAGACATCTTCGAAGATTTATTTCACTGATCGACGAGAAGGAAGAACAGTCCAATAACAGCAGTAAAAAGAGGGTTGAAGCCCAAAGATCACCAGAAGAAGATGGATTGGGGAGGCAGCTAAAGAGGTTACAAACAGAAACAAGTCAAACAATTTCAAAAGTTACATCATGTAATGATATGCTTAGATGTCAACCATCTGATCTGAATTGGTCTGATCTTGAGGTCTATGAAACGTTCTCTCTTCTAGGGCTGTGTACAATGCCCATGGCCCGCTATGCCCTGCTCAACCCGTAA 2517 0.4255 MLLLQAMNLLWAVSCVLVLFTVPPYVISSGNSSRPAVVHIGALFTFDSTIGKVAKIALEEAVKDVNANASILPGSKLVLTEKNSNCSGFLGMVQGNILINFFSRAILLVVSHIQCKFFVGIANLRFMETDVSSVVICSYGPNTIQPSVPFFVRTAMSDLYQMAAVAEIVDYYGWKEVITIFIDDDFGRNGVSALDDQLSARRCRISYKAGIRSEPVVDRSEITDLLVKVALTQSRVIVLHVDPDSGYDFQCCTVSWDDWEWLHSMSVLQGVLFLRQHTPDLDRKKAFMSRGNKLTGGSVGLSSYGLHAYDTVWVLEHAIDAFFNQGGIISFSNDSRIHDVDEGNLNLEAMGIFDNGTLLLNKILQSNFVGLTGPAGFWSNYSGLSIVPPETLYAKPPNRSSANQHLHSVIWPGETLSKPRGWVFSNNGKQLRIGVPIRFSYREFEFLIQVTDMFRGFCIDIFTAALNLLPYAVPYLFVPFGDGRKNPNYDELVRFSLSTLFFAHRENTMSTLGRMVVIIWLFVVLIINSSYTASLTSILTVQPLSSTIKGIDSLKAGDEPRGYQVSSYAEHYLADDVGISKSRLVDLGSPEKYAKALQLGPENGGVAAIVDERPYVEIFLSTQCSFRIVVGQEFTRSGWGFAFPRDSPLATDLSTAILQLSENGDLPQIYDKWLVGRACSTDYTEIDSDRLRFKIFWDLFIICGIACIVALCIYFWQIMLQLRHSAPTAQPSSSNGSSSVSRHLRRFISLIDEKEEQSNNSSKKRVEAQRSPEEDGLGRQLKRLQTETSQTISKVTSCNDMLRCQPSDLNWSDLEVYETFSLLGLCTMPMARYALLNP 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1398 838 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 496 754 - -
Lele02g1398 838 SUPERFAMILY Periplasmic binding protein-like II 407 675 - -
Lele02g1398 838 Pfam Ligand-gated ion channel 490 707 IPR001320 GO:0015276|GO:0016020
Lele02g1398 838 Gene3D - 274 382 - -
Lele02g1398 838 Gene3D - 160 252 - -
Lele02g1398 838 Gene3D - 457 572 - -
Lele02g1398 838 Pfam Bacterial extracellular solute-binding proteins, family 3 531 674 IPR001638 -
Lele02g1398 838 Coils Coil 751 771 - -
Lele02g1398 838 SUPERFAMILY Periplasmic binding protein-like I 32 422 IPR028082 -
Lele02g1398 838 MobiDBLite consensus disorder prediction 754 781 - -
Lele02g1398 838 FunFam Glutamate receptor 570 678 - -
Lele02g1398 838 Gene3D - 33 134 - -
Lele02g1398 838 Gene3D - 640 673 - -
Lele02g1398 838 Gene3D - 603 639 - -
Lele02g1398 838 SMART GluR_14 432 676 IPR001320 GO:0015276|GO:0016020
Lele02g1398 838 MobiDBLite consensus disorder prediction 754 782 - -
Lele02g1398 838 Pfam Receptor family ligand binding region 56 374 IPR001828 -
Lele02g1398 838 PIRSF IGluLR_plant 492 807 IPR017103 -
Lele02g1398 838 PIRSF IGluLR_plant 372 494 IPR017103 -
Lele02g1398 838 PIRSF IGluLR_plant 6 375 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1398 Lele-ChrLele02 18387644 18391787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1398 495 768 Ion Channels AT1G42540 64.643 1.73e-113 366