LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g1385	ATGCACAGTCATCTGTGCAACAAATATAATGCTGTTAATACTTTCCCTAAAGATCCGTTGCATTCAATTGATGCTCTATTATCACTTTTATGGAAGTCATTACCCTCAAACTCCAGAATTAATGATAATCAAGGTGTTAAAGAAGATCACTCAGGAGGGCATTGGGTTGATATCTCAGATCTCATGTCCCAGAGAAAGACACAAGCTCTTGCTCCACAACATTCTGAGAACATGTGGACAAAAGGGAGAATCTGTCAGTCATCTGTTTGTTTGAAGCAGCTGGCTTTTGACCTTGTTGAATTACTAATGGTGACAGAATTTCCAGAACTAGATTATGTATTTGATTGTCAAGAAATGCTTGTTTTTCTTTTTGGAATACCCAAAGCTGCATCAAAATCCTTTGCAATTAAAAAATCATTGAGCATATTGATAAGGGAAGGCAAAGATATATATGAACATATGCATAGCTTCAATAGTTGGAAAAGGTTTCCCAAGAAATACCGTAAAGCTTTTAGGACTTCTCATGATAAAATAATTAAAGATTTGCAACTAAGGGTCATATGGGTGGCACCAAAAAGTGGCAACCTCAAGCTGAACACTGATACCAGTAGACAGAATGGAAAATGCAGCAATACAAGGGTGTTTAGAAATTCTAATGCTGAGCTGGTTTTTGGCTTCTACAAAAGGCTGGAACATGTGGAAAATATCTTCAAAGCTGAGGCTTTAGCTGTACTACAAGGGCTAGCAATTGGGGCACGAAGAGGATACACAAATTTGATACTTGAGTGTGACAATCTGGCAATCACCAAAGTTCTGCAAGACTTGAAGCCTGCCAAAATAATTGAACTTCAATATGCAAAGGATAAGGTAGGGCGTACGAAGAAGGTTTACCACATACTGGTAATGAGTGTGCCAACTTACTGGCCGATCATGCGGGGCTTAGGTCACCGCTTGGTACTCCTGAAGCCCAAACACTCGTGCGGTAGATCTGCAACAGTTATAGTTAAACTTGATACAGAAATTGCTGCAATTGCATTGCTAATCGTTTGCAACAGCTTAATTAATAGTGGTGCTAGCTACTTGGGAGTGGAGCTGTTAAAATCTAATGATGAGGGGAAAGAAAAATGGGTACTCAAGGCCTTGTGGCATCACTCAGATGCTCTATTGTGCTGCACTTTAAATGTATTCTTGAAATCTAATCCAAAATAA	1209	0.3904	MHSHLCNKYNAVNTFPKDPLHSIDALLSLLWKSLPSNSRINDNQGVKEDHSGGHWVDISDLMSQRKTQALAPQHSENMWTKGRICQSSVCLKQLAFDLVELLMVTEFPELDYVFDCQEMLVFLFGIPKAASKSFAIKKSLSILIREGKDIYEHMHSFNSWKRFPKKYRKAFRTSHDKIIKDLQLRVIWVAPKSGNLKLNTDTSRQNGKCSNTRVFRNSNAELVFGFYKRLEHVENIFKAEALAVLQGLAIGARRGYTNLILECDNLAITKVLQDLKPAKIIELQYAKDKVGRTKKVYHILVMSVPTYWPIMRGLGHRLVLLKPKHSCGRSATVIVKLDTEIAAIALLIVCNSLINSGASYLGVELLKSNDEGKEKWVLKALWHHSDALLCCTLNVFLKSNPK	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g1385	402	PANTHER	OS05G0353850 PROTEIN	154	278	-	-
	Lele02g1385	402	Pfam	Reverse transcriptase-like	200	282	IPR002156	GO:0003676\|GO:0004523

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g1385	Lele-ChrLele02	18292453	18296208	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g1385	360	396	Homeobox Transcription Factor Family	AT1G52150	56.757	4.34e-08	53.5