Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1380 ATGGTGAAGGAGACCGAATACTATGACGTGCTGGGAGTCAGTCCCACGGCAACTGAAGCCGAGATGAAAAAAGCCTATTACATGAAGGCACGGCAAGTACATCCAGATAAAAACAGAAATGACCCTGACGCTGCACAAAAATTTCAGGTTTTGGGTGAGGCCTACCAAGTTTTGAGTGACCCAAACCAACGGCAAGCTTATGATACTTGCGGAAAATCTGGAATATCAACGGATGCCATTATTGATCCAGCAGCAATCTTCGCCATGCATTTTGGTAGTGAGCTTTTTGAGGAGTACATAGGCCAATTAGCCATGGCATCAATGGCATCGATGGATATCTTTAGTGAAGGGGAACAATTTGATGCCAAAAAGTTACAAGAGAAAATGAGGGTTGTTCAGAAAGAGAGAGAAGAAAAGCTTGCAGAGATACTTAAAAATAGACTAAACCAGTATGTCCAAGGAAACAAATCGGAATTTACCAATCATGCAAATGATGAAGTGTCACGACTATCCAATGCAGCTTATGGGGTTGATATGTTAAATACCATTGGCTACATATATGCAAGGCAGGCAGCAAAGGAGCTAGGGAAGAAAGCAATTTATTTAGGTATGCCTTTCATTGCTGAGTGGTGTAGAAACAAAGGACACTTCATCAAATCCCAAGTTACAGCAGCTACAGGGGCAATTGCTCTGATCCAGCTGCAGGAGGATATGAAGAAGCAGCTAAGTCAAGAAGGGAACTACACTGAAGTAGAGCTTGAAGAGTACATTGAATCCCACAAGAAATTAATGATTGACTCGTTGTGGAAGCTTAATGTGGCTGACATTGAGGATACCCTATCCCGTGTCTGTCAAATGGTTCTCCAGGACAATAGTGTCAAAAAAGAAGAACTCCGTGCACGAGCTAAGGGATTGAGAACTCTTGGTAAAATCTTTCGGGGAGTTAAGTCAATCGATGGAAATGAGAGTGAAAATGTACCAAATAAACCAGGAATACAAAAATTGAATGGTAGAGAACCAAGTGATGAATCTCGTTCTCCTGGTACATCTCAAAAAAGTTCAAATCCTGATTTTTCGTCACAGATTGCCTCTGTGCCCCAGAGTCCCTATGTGGAGGCCCCTCAATTTGCAGGCTCTTACGTGGACTATAACTTCCCTCGGCCCACAGCACCCCCTGGTGCCCAGAGACCTCCAATCAACAGGGATTGA 1209 0.4326 MVKETEYYDVLGVSPTATEAEMKKAYYMKARQVHPDKNRNDPDAAQKFQVLGEAYQVLSDPNQRQAYDTCGKSGISTDAIIDPAAIFAMHFGSELFEEYIGQLAMASMASMDIFSEGEQFDAKKLQEKMRVVQKEREEKLAEILKNRLNQYVQGNKSEFTNHANDEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGMPFIAEWCRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSQEGNYTEVELEEYIESHKKLMIDSLWKLNVADIEDTLSRVCQMVLQDNSVKKEELRARAKGLRTLGKIFRGVKSIDGNESENVPNKPGIQKLNGREPSDESRSPGTSQKSSNPDFSSQIASVPQSPYVEAPQFAGSYVDYNFPRPTAPPGAQRPPINRD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1380 402 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Lele02g1380 402 MobiDBLite consensus disorder prediction 342 368 - -
Lele02g1380 402 CDD DnaJ 6 60 IPR001623 -
Lele02g1380 402 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 338 - -
Lele02g1380 402 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Lele02g1380 402 Coils Coil 122 142 - -
Lele02g1380 402 PRINTS DnaJ domain signature 63 82 IPR001623 -
Lele02g1380 402 PRINTS DnaJ domain signature 8 26 IPR001623 -
Lele02g1380 402 PRINTS DnaJ domain signature 26 41 IPR001623 -
Lele02g1380 402 PRINTS DnaJ domain signature 43 63 IPR001623 -
Lele02g1380 402 SMART dnaj_3 5 63 IPR001623 -
Lele02g1380 402 Gene3D DnaJ domain 1 83 IPR036869 -
Lele02g1380 402 MobiDBLite consensus disorder prediction 318 402 - -
Lele02g1380 402 Pfam X-domain of DnaJ-containing 133 324 IPR026894 -
Lele02g1380 402 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Lele02g1380 402 Pfam DnaJ domain 6 68 IPR001623 -
Lele02g1380 402 FunFam Chaperone protein dnaJ 10 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1380 Lele-ChrLele02 18245324 18250304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1380 7 69 C2H2 Transcription Factor Family AT1G74250 39.706 1.11e-07 52.0