Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1352 ATGTCCTCGCAGCCAAACGATTTTGTCGAAGGTGATGACGATACTGCAATCAATGCTCCCTTGCTCGTGGGTAACAAGTACCGTCGGCTATGGCGCCGGAGCTTATACATTCGAATCTTCATCTCTCTCACGCGAACAACGCTAACTACCACTGCGACACTCGAATCTGAACAATTACGTCTTGACACCCCATTATCCTGCTCATCATCTCTTCCCACAAGAACTTCCTCGGTTAAATCATCTTGTGCGATTGATGTTGCCACTGATAACGAAGAGGATGGTATTGTAGAACAGCGCATCAAGAGCGATATTGCTCGTATCGTGAAGGAAAAGGACTTGGAATCGCTTCGTGAGCTCGGGGGAGTCGACCGTGTTCGCTCAGTTCTTAGTCGTCGTCAATCACAGGGGGGAAATATTGATGAGAACCATCATGTGTTGGAGACCCCTGACCAAGTTCATGTACGGAGCCTCTCGTACTGTTTTGTGAATAGTTGTAAACGCAATAGTTACACAATTTCATTACTCATGATCTCAGCTCTGTTGTCCTTGACTGTAGAGATCAAGCAGGAAGGACCTAAACATGGCTGGCATGATACTGCTGCCATACTTGTTGCCATAATCATGATTATCTCTTTCTCTTCAGTGGCAAACTTTTGGCGTGAAAGAAAGATGCTAAAATTATCAGAGAAGAAGGGCGAGTTGAAAGTTATGGTTGGTGATACAGTGTGTCTTAAGAAGGGTAACGAGGTTCCAGCTGATGGTTTGCTTCTAAATAATGAAAACTCTCTGTTAGATGAGACACAGGATCCATTTCTCTTATTCGGCTCAAAAGTATCTTTTGAGGGTGAAACTTTGATGCTTGTAACATCAGTTAGAAACAAAAGATCAGGTGAGATGCAGAATTCAGCGGCAAATAATCCTGAAAAGATTATGCGGTTGGAAAGCCGAATTGAGAAGCCGATTTCTTTCATGGACAAAGTTTCCTCTCTTATCTCTGCATTGGTTATGTTTGTGGTGCTCATTCGCCTGCTTGGCAAGGAAAATGGGGACAACATTGGGTTACCAGAAATTAAGGGTAAGGTTTCAGTTGGCTTCGTGATGGAATTGATAAAGAGAATTTTCTTGAAACCACTAGGAAAAGTTTCCATTTTAACTAGCCTTATAACTGTTGTAATAATAAGTATGCAACATGGGGTACCACTTATGGTTACAATTTCTCTCAAATACCAAATGGACAAGGTGATATCAAACCAAGTTGCAGATCTCCATGATTTATCGTCTTGTGCAACAATGGGACTGGTTACAGTCATCTGCATCGACGCATCTGGTGGCCTAATGTCTAAACTGATGGAGGTTAGTAGAATTCGGATTGGGGAGAGAGATATCAGCAATGACGTGACATCAGAAATTAGTTCAGATGTGATTGACATACTTCAGCGAGGAGCCAGCGTATCTGTTCTTGCTCCGGAGTTTAGTCTTTCTCCGGTGTCCAATTCACTTATATCTTGGGCAAAAACCACTTGGGGCGTGAACGGAGAATCTTTTGGTGAGAAACTTACCATTCTTCAGCATAGAAAACAAAATTATAATGGAAACGGTGTTTTAGTGAAAGTTGGAGACCATGAAGATCTCCACTTGCACTGGAGTGGGGCAGCATCTACAATTCTGGAAATGTGTTCCCATTATTGTGATAGTGATGGGGATTGCCATGGCATAACAAATCAGAAAATCATATTTGGATCGGTCATTAAAGAAATGGAGGATAGCGGCCTTGAGCCTGTTGCACTTGCTTATAAGACACAGGCTCAAGAACTTCAACAAGATGGACTAATCTTGCTAGCTCTAATAGGTCTGAAACACACGTGCCTTGACGAGGCAAAGTTAGCGTTGGAACGCCTAAAAAATGATGGAATCAAGATCAAATTAGTGTCAGGGCAAGACATAATGGCGGTGAGAGCCTTAGCTTGTGAACTAGGAATAGAAGTTCCCGGTGAAGATGGTGTTATTCCTGAAGGAAAAGAAATTCAGGATTTGAATAGGACATCCAGGTTAAAGAAGTTGGATGAAGCACTGGTAATGGGAGGTTTCCTTCCTGATGACAAGGTTCTCATGATTAAATGTTTGCAAGATGAAGGGGATAATGTGGTTGCATTCTTTGGAGGGTTGACAGTAAGTGATGCTGCAGTTCGAGAGGCAGCTGATATAGTGATAGATGCCAAGTCTCAGCTGAATAACCCAAAATCTGATATGGAGAGTTCGAATATATCTGTTGAATGTTTCAGTGCAATAACTACAATTGTGAGGGCTGGCAGATGTCTATATCGCAATATTCAGAAGTTCATTCAACTTCAGCTCACAGCTAGCTCATCTGGGTTATTCATAACCTTGATCACAACAATATTCACCGGACAATCTCCCCTAACGGCCATCCAATTGATTTGGGTGAGCGTGATGATGTGCCTTTTGGGAGGCCTAATGATGTCAATTATCGAGGAGGAGGATCAGCATGCCATTGCCAGGCAACCAAATGACAGGAAGCAATCAATTATAACCCAAGAAATCTGGAAAGACATAGCTATTGAAGTCTTGTATCAGGCTTCTGTTTCTATGATATTTCTCTTTGGAGGACAAGTTACAGACAGCGCAGAACAAGTTAGGAAGACTATGATCTTCAACACGTTCATGCTATGTCAGCTCGTCAATCAACTTAACGTCGTCTTGCGCCTGGTGAAGAAGGGAGTTTTCAAGATGGTTCTTCTGAGCTACTGCTGTTTCTTGGTTGCATTAGGGGTTTGCCTGATTATGCAGGTTCTGGTGATTCAATATGCAAAGAGCCTAGCAGATTGCGTGAGGCTAAATGCAACTCAATGGGTTATCTGTATCGTGGTTAGTGCTCTTTCATGGGTAATTGAGTGGCCATTCAACAAGATTCTTACTTGGATATTTCGTCATTTTCATCCCTGTAACATGTAA 2973 0.4242 MSSQPNDFVEGDDDTAINAPLLVGNKYRRLWRRSLYIRIFISLTRTTLTTTATLESEQLRLDTPLSCSSSLPTRTSSVKSSCAIDVATDNEEDGIVEQRIKSDIARIVKEKDLESLRELGGVDRVRSVLSRRQSQGGNIDENHHVLETPDQVHVRSLSYCFVNSCKRNSYTISLLMISALLSLTVEIKQEGPKHGWHDTAAILVAIIMIISFSSVANFWRERKMLKLSEKKGELKVMVGDTVCLKKGNEVPADGLLLNNENSLLDETQDPFLLFGSKVSFEGETLMLVTSVRNKRSGEMQNSAANNPEKIMRLESRIEKPISFMDKVSSLISALVMFVVLIRLLGKENGDNIGLPEIKGKVSVGFVMELIKRIFLKPLGKVSILTSLITVVIISMQHGVPLMVTISLKYQMDKVISNQVADLHDLSSCATMGLVTVICIDASGGLMSKLMEVSRIRIGERDISNDVTSEISSDVIDILQRGASVSVLAPEFSLSPVSNSLISWAKTTWGVNGESFGEKLTILQHRKQNYNGNGVLVKVGDHEDLHLHWSGAASTILEMCSHYCDSDGDCHGITNQKIIFGSVIKEMEDSGLEPVALAYKTQAQELQQDGLILLALIGLKHTCLDEAKLALERLKNDGIKIKLVSGQDIMAVRALACELGIEVPGEDGVIPEGKEIQDLNRTSRLKKLDEALVMGGFLPDDKVLMIKCLQDEGDNVVAFFGGLTVSDAAVREAADIVIDAKSQLNNPKSDMESSNISVECFSAITTIVRAGRCLYRNIQKFIQLQLTASSSGLFITLITTIFTGQSPLTAIQLIWVSVMMCLLGGLMMSIIEEEDQHAIARQPNDRKQSIITQEIWKDIAIEVLYQASVSMIFLFGGQVTDSAEQVRKTMIFNTFMLCQLVNQLNVVLRLVKKGVFKMVLLSYCCFLVALGVCLIMQVLVIQYAKSLADCVRLNATQWVICIVVSALSWVIEWPFNKILTWIFRHFHPCNM 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1352 990 PANTHER CATION TRANSPORTING ATPASE 101 975 - -
Lele02g1352 990 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 982 IPR023298 -
Lele02g1352 990 Gene3D - 524 614 IPR023299 GO:0000166
Lele02g1352 990 SUPERFAMILY HAD-like 611 737 IPR036412 -
Lele02g1352 990 Gene3D - 255 449 - -
Lele02g1352 990 Gene3D - 758 985 - -
Lele02g1352 990 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 535 618 IPR023299 GO:0000166
Lele02g1352 990 Pfam Cation transporting ATPase, C-terminus 805 971 IPR006068 -
Lele02g1352 990 SUPERFAMILY Calcium ATPase, transduction domain A 235 290 IPR008250 -
Lele02g1352 990 Gene3D - 615 757 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1352 Lele-ChrLele02 17992207 17996074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1352 101 978 Primary Pumps ATPases AT3G63380 33.156 3.20e-132 423