Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1345 ATGGTTTCTTCAGACAAAAGTGCTGATCGCAATGTTTCTTCTGATAAATTGCATCAGAGGCTGAGTTCTCAAAGCGATATTACTGTCTCAGAAGAGACTTGTGATGATAAAATTGATTCATCCAACCCAGAGGGAGCAAGAAGAATTCCTTCTGTTGCAGCCGAGAAAGAAGTGCAGGATTCTGATGCTACACCCGATGCATTGCAATCAGATCAAGAAGGAAGTGCATGTACCTCACCACTTCAAAGACCTTTGCACAGTCCTAGTAGTGATCAGCGTCGATTGCAATCCAGTGAGGAAAGTCCCTCTATAATATGTGAAAAGAGTTCAAAAGATAGTGTAACCAAAGTAGTAGTGTGGGATTCTGATGCTACTGCCAATGCACGGAAATCAGAGCAACTCATGTTGTCTTTACCGCATGAGAAACCCTTGCAAAATCCTAGCACCATTCCACACGCATTGCATTGTGGTCAGGATGGTCCCTCTATAGCACGTGAAGAAGTCTCAAAGGATGGATATAATTGGCGAAAATATGGCCAGAAAAATGTTAAGGGCAATGAATATATACGGAGCTATTACAAGTGCACACATCCCAACTGCCCAGCGAAGAAGCAGTTGGAACAGTCAAATAATGGACAGATTACAGATACCATTTGCATCGGTCAGCATAATCATCCGCAAGTGAACAGTTCACAACCTGTCAAAGAAAAATCAAAGGCGCCCTCTCTAGCCGACATGAGAGACAAAACATCCATTGAGCATGGATGTGTGTCTCAACAGATGAAGTCTCTAGAAACTCATCCAGTTTCAACAGTTTCCACAATTAACAAGCTCAAAGCTGCACCTTTACAGTCGATTAGAACAAGGGATGTGGTTCTTGCCAATGACGATCCTGATTTAAAACGCCTGAAGAAAAACAATAGTAATGCTGATGGCCCTGGGGTTAAGAGATCAGTTGGTGAATCTCGTCTTGTTGTTCAGACTTCAAGTGAGGTTGATTTTATTAATGATGGGTACCGTTGGCGCAAGTATGGGCAGAAACTAGTAAAAGGAAATCCAAATCCAAGCTATTACCGGTGCTCAAGTCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATAAAAAAATTGTGATAACCACCTATGAGGGACATCATGATCATGAAAGCCCCTCTGGAAGGACTGGTATTAATTACGGAGCAGCAGATACTTCCACAACAATTATCAACAGTGACTCGGGAACCAAATCAGGGGAAAACTTTGTTTGTGTCCATCCAGCAGAACAACAGATTTGCTTGCACTTAGAAAGCAGGTCACAGGAGCAACCAAATGGTGAGCAAATTGCTAAACCAAAGACTTGTGATATGGATGAATCTCAAGGGATTGCTACTCGAGTCTCCGAAAGTCCTGCAAGTGAGAAAGAACAAAATGGCGACGCAGGTGCGGGAAATGATTCAGGTAGCCATGGCACCACATGCCATTCAGGTTCTGAGCCTCCATGTGGATTAAATAAACAGCAGAAAGATGAGGTAAGATCCATATCAGAAGAAAGTAAGTTAAACAAGGAATCTGAACCTGATGCAGAACCTGTCCCAAGCTAA 1611 0.4302 MVSSDKSADRNVSSDKLHQRLSSQSDITVSEETCDDKIDSSNPEGARRIPSVAAEKEVQDSDATPDALQSDQEGSACTSPLQRPLHSPSSDQRRLQSSEESPSIICEKSSKDSVTKVVVWDSDATANARKSEQLMLSLPHEKPLQNPSTIPHALHCGQDGPSIAREEVSKDGYNWRKYGQKNVKGNEYIRSYYKCTHPNCPAKKQLEQSNNGQITDTICIGQHNHPQVNSSQPVKEKSKAPSLADMRDKTSIEHGCVSQQMKSLETHPVSTVSTINKLKAAPLQSIRTRDVVLANDDPDLKRLKKNNSNADGPGVKRSVGESRLVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPSYYRCSSPGCPVKKHVERASHDKKIVITTYEGHHDHESPSGRTGINYGAADTSTTIINSDSGTKSGENFVCVHPAEQQICLHLESRSQEQPNGEQIAKPKTCDMDESQGIATRVSESPASEKEQNGDAGAGNDSGSHGTTCHSGSEPPCGLNKQQKDEVRSISEESKLNKESEPDAEPVPS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1345 536 MobiDBLite consensus disorder prediction 63 108 - -
Lele02g1345 536 MobiDBLite consensus disorder prediction 512 529 - -
Lele02g1345 536 SUPERFAMILY WRKY DNA-binding domain 327 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 FunFam WRKY transcription factor 323 395 - -
Lele02g1345 536 SUPERFAMILY WRKY DNA-binding domain 166 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 ProSiteProfiles WRKY domain profile. 164 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 414 IPR044810 GO:0003700
Lele02g1345 536 SMART WRKY_cls 335 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 SMART WRKY_cls 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 MobiDBLite consensus disorder prediction 439 536 - -
Lele02g1345 536 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 Pfam WRKY DNA -binding domain 336 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 MobiDBLite consensus disorder prediction 1 108 - -
Lele02g1345 536 MobiDBLite consensus disorder prediction 463 505 - -
Lele02g1345 536 MobiDBLite consensus disorder prediction 224 246 - -
Lele02g1345 536 Gene3D WRKY domain 162 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 FunFam WRKY transcription factor 160 229 - -
Lele02g1345 536 ProSiteProfiles WRKY domain profile. 330 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1345 536 Gene3D WRKY domain 322 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1345 Lele-ChrLele02 17921977 17924939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1345 153 398 WRKY Transcription Factor Family AT2G04880 49.615 3.31e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele02g1345 WRKY 8.8e-23 CL0274