LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g1342	ATGCTTCTATCTCCAGGCCACTCCCCTCGCCATATCTCTTCGCCCTCTCCTTCTCTGTCCCAAGTTTCTGGGCAAAATCCCAATGATTCATCCTCTGAAATCGCTCCTAAGTTCCTCCGCAAGAACCAGGCCGTCCTCGATGAGGACACGTATATTGCCGCCATCGAGAAGATCATCGAGCGCGACTTCTTCCCTGATATCTCCAAGCTTAGGGATCGCCTTGACTGGCTCGAAGCAATCAAGACTGGCGATCCGGTTCAGATTCGTGATGCCCAGTTGAAGATCATGGAACGCCGTGGACGGAAGGTAAATAATTCTAACACTGATGGTAGAACGCAAACTCCCGGTTCCACTTTTGCTAGAAATTTTACCCCTTTTGATGAATTTGATGGCAAAACCCCGAGAACACCCGGTTTTACGAATGGGGAAGCTTCTGTGGGTGGTCATACGAGTGAGGAAGATGGTGGGGTGAATATATCGCTTAGTCTGGATCAGTTTCTTAATACGTATACGAGTGAGGACAATTATAGTTTTTCTAAGATTTTGGAGAAAGTTAATAAGAAGAGGAAGGAGAGATTTGGGTACCTGACAGAAGGGGAGAAGGAACATGTTGCAGCTATTGAAGATGCAAAGAGGGATAGGATAACAGATGGATATGGGACGTCTGATCAGCCCCCAAGTACCTTAGAGGGTTGGAACTATACAGCAAAAAATCTGTTGATGTATCATCCAACTGATCGTGGGGAAGCCACCCTAACTGAAGAGGAAAGGGCTGTAAGAATGAAAGGCCTGACAAAGGAGATTAATCGTACAAATACAAGATTTCATTGTAAAATGATGGAATCTAGGCCAAATGAAGATGGAACTGTTGAGGTGCTTTATAACACTGTTGCTGGTGCAACCCCAGTTCCCATATCTGATAGAGAAGGGGAGAAATTAAAGAAGTATGATTTGGAAGATTTAAGGAAGACTCCAATTCCATTCTATGTTGAATCCGCCAAGAAAGCTGATAATGGTTATAGCTTTGTGAGGACACCATCTCCTGCTCCAGGAGTCAGTGAATCCCCATTTATTACTTGGGGTGAAATTGAAGGGACCCCGTTGAGGTTGGATCCAGAGGATACGCCAATTGATATTGGTGGTAGTGCTGATGGACCTCATTACAAGATTCCTTCTGCACCTGCAAGAGATGAAAAGGCTCACTCGCTTTCTAGGGAGGCTGCACGTAAGCTGAGGGAAAGGTCAAAGATGTTTCATAAGCCTCCATTGCCATCACCAGTTAGAGGTGGAAGTGCTAGCCCAAGCGGTCAGACTCTTTCTCCTGCTGCACAGAAGTTTGTGAGGAATGCTATTGCCAAATCCTCATCCTCTGTTGATGAAACACTTCGTGCTAGTTACCGTGGTTCTAGTCCTGCTTTGAATACTCCTAGAAGTGTTAGAAGTGTATCAAGGATTAAATTTGCTGAGCAATTCAGCCACAGAATTCCGGTTCTTCAGCTACGTACGATCCTCCTTTCACTCGATTGGTTATTGAAAATGCCAGCTGAGAACTCACACTCGAACACTTCTGATCTCATAGAACCATTTGCTGAAGTTGACCCAACTGGTAGGTTTGGGCGGTACCATGATCTGCTTGGCAGTGGTGCTGTGAAAAAGGTTTATAGGGCCTTTGATCAAGAGGAAGGCATAGAGGTAGCCTGGAATCAGGTGCGACTGAGGAATTTTAGTGAAGATCCTGTGCTCTTAAATCGTCTTCACTCTGAGGTTGAGTTGCTTAGAACATTGAAGAACAAATATATCATTGTTTGTTATAGTGTTTGGAAAGATGAAGAGAGGAACAATTTAAATTTTATTACTGAGGTATGCACTTCTGGGAATCTGAGGTCCTACAGGAAGAAACATCGTCATGTATCCATTAAGGCATTGAAGAAGTGGTCAAAACAAGTTCTTGAAGGATTGGAATATCTACATACACATGAACCATGCATTATTCACAGAGATCTTAATTGTAGTAACATTTTCATTAATGGGAATATTGGCCAGGTGAAAATTGGTGACCTTGGACTGGCTGCAATAGTTGGAAAGAGTCATGCAGCACATTCAATTATAGGGACACCAGAATATATGGCTCCAGAGCTGTATGAGGAGGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAGATGGTCACAATGGACATACCATACAGTGAATGTGACAGTATTGCCAAGATATACAAGAAGGTAACAACAGGAATAAAGCCGCAGGCTCTAAACAAAGTCACTAACGCAGAGTTGAAGGCTTTCATTGAGAAGTGCATTGCTCAACCAAGGGCAAGACCTTCAGCCACAGATCTTCTCAAGGATCCTTTCTTTTCTGAACTCAACAACGACCAGTTAGGACCAAATCCAGACCCAACTGGTTAA	2442	0.4373	MLLSPGHSPRHISSPSPSLSQVSGQNPNDSSSEIAPKFLRKNQAVLDEDTYIAAIEKIIERDFFPDISKLRDRLDWLEAIKTGDPVQIRDAQLKIMERRGRKVNNSNTDGRTQTPGSTFARNFTPFDEFDGKTPRTPGFTNGEASVGGHTSEEDGGVNISLSLDQFLNTYTSEDNYSFSKILEKVNKKRKERFGYLTEGEKEHVAAIEDAKRDRITDGYGTSDQPPSTLEGWNYTAKNLLMYHPTDRGEATLTEEERAVRMKGLTKEINRTNTRFHCKMMESRPNEDGTVEVLYNTVAGATPVPISDREGEKLKKYDLEDLRKTPIPFYVESAKKADNGYSFVRTPSPAPGVSESPFITWGEIEGTPLRLDPEDTPIDIGGSADGPHYKIPSAPARDEKAHSLSREAARKLRERSKMFHKPPLPSPVRGGSASPSGQTLSPAAQKFVRNAIAKSSSSVDETLRASYRGSSPALNTPRSVRSVSRIKFAEQFSHRIPVLQLRTILLSLDWLLKMPAENSHSNTSDLIEPFAEVDPTGRFGRYHDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVLLNRLHSEVELLRTLKNKYIIVCYSVWKDEERNNLNFITEVCTSGNLRSYRKKHRHVSIKALKKWSKQVLEGLEYLHTHEPCIIHRDLNCSNIFINGNIGQVKIGDLGLAAIVGKSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMDIPYSECDSIAKIYKKVTTGIKPQALNKVTNAELKAFIEKCIAQPRARPSATDLLKDPFFSELNNDQLGPNPDPTG	813

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g1342	813	PANTHER	ES-2 PROTEIN - RELATED	4	513	IPR019148	-
	Lele02g1342	813	FunFam	Probable serine/threonine-protein kinase WNK1	524	620	-	-
	Lele02g1342	813	Gene3D	Transferase(Phosphotransferase) domain 1	622	803	-	-
	Lele02g1342	813	MobiDBLite	consensus disorder prediction	106	121	-	-
	Lele02g1342	813	Gene3D	Phosphorylase Kinase; domain 1	526	620	-	-
	Lele02g1342	813	MobiDBLite	consensus disorder prediction	103	153	-	-
	Lele02g1342	813	Pfam	Nuclear protein Es2	43	446	IPR019148	-
	Lele02g1342	813	FunFam	probable serine/threonine-protein kinase WNK9	622	803	-	-
	Lele02g1342	813	MobiDBLite	consensus disorder prediction	412	439	-	-
	Lele02g1342	813	MobiDBLite	consensus disorder prediction	1	34	-	-
	Lele02g1342	813	Pfam	Protein kinase domain	543	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g1342	813	CDD	STKc_WNK	537	797	-	-
	Lele02g1342	813	SUPERFAMILY	Protein kinase-like (PK-like)	533	797	IPR011009	-
	Lele02g1342	813	ProSiteProfiles	Protein kinase domain profile.	539	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g1342	813	MobiDBLite	consensus disorder prediction	9	34	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g1342	Lele-ChrLele02	17900419	17907590	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g1342	527	797	MAP Kinase Kinase Kinase	AT5G55560	78.598	4.25e-163	474

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Lele02g1342		Es2	5.5e-97	No_clan