Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1310 ATGGAAGCAAGCAAAGAAGAGGAGGCTCATAAAGCAATAGAAATTGCTGAGCAGCGATTTACTCAGAGAGACTTTGCTGGGGCAAAAAATTATGCATTGAAGGCCAAAACCCTTTGTCCAGAAATGGAGGGCATAGCTCAAATGGTGGCGACATTTGAAGTGTACATTGCTTCTGAGATTAAAAGTAATGCTGAAAGAGATTATTATTCGATTCTCGGATTAAAACCTTCAGCAGATGAAGAGAGCATCAAGAAACAGTACAGGAAGATGGCTGTGTTGCTTCACCCGGATAAGAACAAATGTGTAGGAGCTGATGGAGCTTTTAAGCTTGTATCTGAAGCGTGGACATGGTTGTCAGATAATGCTAAGCGTAGTTCTTATGATCTCAAGAGAAATACACAACTATCCGCTGGGATTAATCAGACAAATTTGTCTTCAGTCCATGCTACCGGATCTACAGGTTATACTTACAATAAATGCTCCAATTTTTCGACCTCCCATGGTAGGCTTGACACTTTCTGGACAATTTGCACTTCTTGTAATGTTCAGTACGAGTATCTACGCAAATATGTGAATAAGAGACTTTCATGCAAAAACTGCCGTGGCACTTTCATTGCCGTGGAAACTGGGGCAGCCCCAGCAAATGGTTCCTTCCCATACGGTCCTTGGTCTTATACGCTGGGTAATAGTTATGGAAGCCATTCATTTGATGGAGTTACGTATGTCCCAACTAGAGCTCCCTATTTTAATGGAAATGGAGTTACTGGATACCATTCTGGACATGGATATGAGTATGTTCCAAATGTCTCATTTCAATGGAGCTCAACAGGACATGTTAGTCACAACGGATCTACTACATTATCTTCTGGTTCAGTATATCAGGCCAATGGAAGTGCAAAGAGAGGAAGACCAAAAATCAGATCAGGAGTTGATAGGAGTCATCGTGTGGGAGAGACTGTGCTCACTATGAATCCAGATGTATCACACTCTTGTTATGATCCGCAGGAAATTAAGCCTAGTAAACCTGATAAGAGAAGGAAAGTTGTTGTGGAAGCTGGCTCAAGAAATAACTATGAAGAAAATGACTTGAAAGTTGCTCCAGAGTCAAGATTGGCCAATAAAAATGAAAGCATTGGGCAAGGCCCAAGGCTTTCCAGTACAAGTGAAGTTCAGTCTAAACAGTCTTCCATGGAATTGGTGTTTGACACTAGAAAAGCATTGATTGAGAAGGCCAGAACAGAAATTAGAAAGAAACTGGAAGAGATGAAGTTGAAGTTGAAATCTGAAACGGCTGCTGCGGTTAAGGGGAATGAGAAAGCAAAATCTGAAGTTATTGAAGACAAACGAGATATAAATGGGCGACCGATTCTAAATTTTTCTGGTCATCAACTAGAGCATAGGAAAACCGTTCCAGTCTCGATCACTGTCCCAGATTCTGATTTTCATGATTTTGATAAAGATAGGTTGGAGGAATGCTTCAAGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGATGGCATGCCTCGATTGTATTGTATCATCCGTGAGGTTATTTCTACCAATCCATTTAAGATTCATATTAGTTACTTAAGCTCCAAAACTGATACTGAGTTTGGCTCAGTGAATTGGCTAGATTCAGGTTTTACCAAATCTTGCGGAAATTTTAGGGCGTGGAGCTCTGATATTGTTGAGCATGTTAACATTTTTTCTCATGTTCTCAACCGTGAGAAGGCTGGTCGAGGTGGTTGTGTTCGTATATATCCTAGAGTAGGAGCTATTTGGGCTGTTTATCGAAATTGGTCACCGGAATGGAACAGAGGCACGCCAGAGGAAGTGAGGCATCAGTATGAAATGGTGGAGGTTCTTGATGAATATTCGGAGGAGTTCGGGGTTTGTGTTACTCCCCTTGTGAAGTTAGATGGATTCAAAACAGTATATCAGAGGAATCCGGACAAAAGTGCCATTAGATGGATACCGAGACGAGAAATGTTGCGCTTCTCGCACCAAGTACCGTCATGGTTAGTCAAGGGAAAAGGAAGCAATTTGCCAGAAAGGTGTTGGGATCTGGATCCAGCTGCCACTCCAGATGGACTTCTTCACGCTGCAACTGCTGAAGGAAACGGTTTGTAG 2133 0.4201 MEASKEEEAHKAIEIAEQRFTQRDFAGAKNYALKAKTLCPEMEGIAQMVATFEVYIASEIKSNAERDYYSILGLKPSADEESIKKQYRKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDNAKRSSYDLKRNTQLSAGINQTNLSSVHATGSTGYTYNKCSNFSTSHGRLDTFWTICTSCNVQYEYLRKYVNKRLSCKNCRGTFIAVETGAAPANGSFPYGPWSYTLGNSYGSHSFDGVTYVPTRAPYFNGNGVTGYHSGHGYEYVPNVSFQWSSTGHVSHNGSTTLSSGSVYQANGSAKRGRPKIRSGVDRSHRVGETVLTMNPDVSHSCYDPQEIKPSKPDKRRKVVVEAGSRNNYEENDLKVAPESRLANKNESIGQGPRLSSTSEVQSKQSSMELVFDTRKALIEKARTEIRKKLEEMKLKLKSETAAAVKGNEKAKSEVIEDKRDINGRPILNFSGHQLEHRKTVPVSITVPDSDFHDFDKDRLEECFKPKQIWALYDEEDGMPRLYCIIREVISTNPFKIHISYLSSKTDTEFGSVNWLDSGFTKSCGNFRAWSSDIVEHVNIFSHVLNREKAGRGGCVRIYPRVGAIWAVYRNWSPEWNRGTPEEVRHQYEMVEVLDEYSEEFGVCVTPLVKLDGFKTVYQRNPDKSAIRWIPRREMLRFSHQVPSWLVKGKGSNLPERCWDLDPAATPDGLLHAATAEGNGL 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1310 710 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele02g1310 710 PRINTS DnaJ domain signature 123 142 IPR001623 -
Lele02g1310 710 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele02g1310 710 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele02g1310 710 MobiDBLite consensus disorder prediction 373 391 - -
Lele02g1310 710 MobiDBLite consensus disorder prediction 324 391 - -
Lele02g1310 710 Gene3D DnaJ domain 55 152 IPR036869 -
Lele02g1310 710 Pfam DnaJ domain 67 128 IPR001623 -
Lele02g1310 710 CDD DnaJ 67 120 IPR001623 -
Lele02g1310 710 SMART dnaj_3 66 123 IPR001623 -
Lele02g1310 710 Pfam Domain of unknown function (DUF3444) 473 678 IPR024593 -
Lele02g1310 710 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele02g1310 710 Coils Coil 405 432 - -
Lele02g1310 710 SUPERFAMILY Chaperone J-domain 64 139 IPR036869 -
Lele02g1310 710 MobiDBLite consensus disorder prediction 336 369 - -
Lele02g1310 710 PANTHER BNAC03G44070D PROTEIN 1 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1310 Lele-ChrLele02 17468994 17471126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1310 8 305 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.721 1.16e-32 127