Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1289 ATGAAGAAGGTTCAATGGGATACGGAGACAGGTCAAGTGATATCAACTTTCTCAACTGGGAAAATCCCTTATGTGGTCAAGCTTAATCCTGATGAAGATAAGCAGAATGTTTTGTTGGCTGGTATGAGTGATAAAAAGATTGTTCAGTGGGATATGAATACTGGGCAGATAACACAAGAGTATGATCAGCATTTTGGGGCTGTGAATACCGTCACATTTGTTGATAACAACAGGAGATTTGTTACTTCCAGTGACGACAAGTATCTCCGAGTATGGGAATTTGGTGTGGTTATTAAGTATATCACCGAACCACACATGCACTCTATGCCATGCATTTCCCTTCATCCTAACTCCAATTGGTGGCTTGCTGTACAAAAGCTTGGATAA 387 0.4057 MKKVQWDTETGQVISTFSTGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQHFGAVNTVTFVDNNRRFVTSSDDKYLRVWEFGVVIKYITEPHMHSMPCISLHPNSNWWLAVQKLG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1289 128 Gene3D - 4 127 IPR015943 GO:0005515
Lele02g1289 128 PANTHER PRE-MRNA-PROCESSING FACTOR 17 6 126 IPR032847 GO:0000398|GO:0071013
Lele02g1289 128 Pfam WD domain, G-beta repeat 55 92 IPR001680 GO:0005515
Lele02g1289 128 SMART WD40_4 10 51 IPR001680 GO:0005515
Lele02g1289 128 SMART WD40_4 54 93 IPR001680 GO:0005515
Lele02g1289 128 ProSiteProfiles Trp-Asp (WD) repeats profile. 61 93 IPR001680 GO:0005515
Lele02g1289 128 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 61 93 - -
Lele02g1289 128 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 5 120 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1289 Lele-ChrLele02 17064687 17066402 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1289 35 123 U-box Gene Family AT2G33340 24.731 8.83e-06 42.0