Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1285 ATGCTGGATTTTTTAGAAGACGCCTCTATTGAGCTGTTCGTCTTTGATGAGCAGTATAATAATTTCTACAAGTTTGGCTATGCTGCTGATCCGTCGGCCTCTGCTGGATATAATTATGTTGGGGACCTGGAGTCACTGCAGAAGAACGACGGGATTTCGGTTTACAACATACAAAAGCATAGACAGAAAAGGAGGAAACTTGAAAAGAAAAAAGAATCAATGAACAACGAGGATGCAGAGGGAGATGATGTTGACATGATTGAGGTTGATAACCCAGCCACTGATACGTGGTTACTGAAGAATAAGAAGAACCCATGTGCGGGTAAAAGGGAGGGATTGCAAACTGAATTAACTGAGGAGCAGAAGAAATATGCAGAAGAATATACCAAGAAGAAAGGAGAAGCAAAGAGTGGATTTGGAGAACGCATATGTGCATTCACAGCAGTTAGAGATATTTGTTTTAGTAACGACGGGACTAAGTTTTTGAGTGCTGGTTATGATACAAATATCAAGTATTGGGATACGGAGACAGGTCAAGTGATATCAACTTTCTCAACTGGGAAAATCCCTTATGTGGTCAAGCTTAATCCTAATGAAGATAAGCAGAATGTTTTGTTGGCTGGTATGAGTGATAAAAAGATTGTTCAGTGGGATATGAATACTGGGCAGATAACACAAGAGTATGATCAGCATTTTGGGGCTGTGAATACCGTCACATTTGTTGATAACAACAGGAGATTTGTTACTTCCAGTGACGGCAAGTATCTCCGAGTATGGGAATTTGGTATTCCTGTGGTTATTAAGTATATCAGCGAACCACACATGCACTCTATGCCATCCATTTCCCTTCATCCTAACTCCAATTGGTGGCTTGCTGTACAAAGCTTGGATAATCAGATCCTTATCTATAGCGCTAGGGAGAAGTTCCAACTTAACAAGAAAACGATGTTTGCTGGACACATTGTTGCTGGATATGCGTGTCTGGTGAATTTTTCCCCAGATGGGCGCTTTGTCATATCTGGAGATTGGAAGAGTTGGTTCTAG 1044 0.41 MLDFLEDASIELFVFDEQYNNFYKFGYAADPSASAGYNYVGDLESLQKNDGISVYNIQKHRQKRRKLEKKKESMNNEDAEGDDVDMIEVDNPATDTWLLKNKKNPCAGKREGLQTELTEEQKKYAEEYTKKKGEAKSGFGERICAFTAVRDICFSNDGTKFLSAGYDTNIKYWDTETGQVISTFSTGKIPYVVKLNPNEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQHFGAVNTVTFVDNNRRFVTSSDGKYLRVWEFGIPVVIKYISEPHMHSMPSISLHPNSNWWLAVQSLDNQILIYSAREKFQLNKKTMFAGHIVAGYACLVNFSPDGRFVISGDWKSWF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1285 347 Coils Coil 57 80 - -
Lele02g1285 347 SUPERFAMILY WD40 repeat-like 148 344 IPR036322 GO:0005515
Lele02g1285 347 PANTHER PRE-MRNA-PROCESSING FACTOR 17 3 135 IPR032847 GO:0000398|GO:0071013
Lele02g1285 347 ProSiteProfiles Trp-Asp (WD) repeats profile. 228 260 IPR001680 GO:0005515
Lele02g1285 347 Gene3D - 145 346 IPR015943 GO:0005515
Lele02g1285 347 ProSiteProfiles Trp-Asp (WD) repeats profile. 149 183 IPR001680 GO:0005515
Lele02g1285 347 Pfam WD domain, G-beta repeat 148 174 IPR001680 GO:0005515
Lele02g1285 347 Pfam WD domain, G-beta repeat 222 259 IPR001680 GO:0005515
Lele02g1285 347 SMART WD40_4 139 174 IPR001680 GO:0005515
Lele02g1285 347 SMART WD40_4 264 304 IPR001680 GO:0005515
Lele02g1285 347 SMART WD40_4 177 218 IPR001680 GO:0005515
Lele02g1285 347 SMART WD40_4 221 260 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1285 Lele-ChrLele02 17014244 17015560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1285 148 261 Eukaryotic Initiation Factors Gene Family AT2G46290 26.772 9.48e-07 48.1