Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1278 ATGGAAACAACTGTGCCACCAGGCTTCAAGTTTAACCCACCAGACCAAGAATTGACATGGCATTACTTGTATAACAAGGTTAATAGCAAACCCCTCCCTTGTAATGCAGTTATTGATTGTGACATTTATGGATATGATAGTTCTTGGATAAAGATGTTTGAGGATTGGGAAGAGGAATCTCTGTACTTCCTCACTAGATTAAGAAACTGGAGCACCCAAAAAAGTGGTTCTTCTTCAAGGGATGCTCCATTTCTTGAAGAGCTAAAGAAAGAAGATAATAAACTTGAGGGTTCTGAGATGCTTCTTGATTATAATCTTGAGGTAGATATAAATTATGATTGTTTGCCATATTTTCTTAAAGATAAGGATCTAGATGATTTTTCCTTTCTTTCGTCACCAAGTTTAGACAAAAAAGATGTTATTACACAAAAAAAATCTACTAGTGTTGCTGGCAATATTGTTCTTGCTGCTGCATATACACATTGGTTGCCTCGCTATGGTCTCAAAGTAGTCCTACAAACTATACTTCAGGCTTTCTTAGAGGGCTTTTCTGTTGAACCTTATGGTACTAGGAGACCTTCCTGTGCAATACTTGATGTTGGCCTCTCTAAGATCACAACTGTTCATTGTCACTGTGCAAGACCATTTACTATGAAATATCTAGGAAGTCACACTATTCTATTCATTGCTTTATCTTTTCTTTACGTCCCTATTATTTCTTCTTCCACAACTAGCAACCATGTTTCTGATGTTGTCAAAATCCATGCTCTTGTTGCATTTCTTGCTTCATTTAATGTTCTCTTAACATTCTTGCCCCATTTTCGAGAGAGAAGGAAAGAAAAGATATGGCAGAAGGGAAAGGATAAAATTGAAGAGAAGCAAGATTGA 888 0.366 METTVPPGFKFNPPDQELTWHYLYNKVNSKPLPCNAVIDCDIYGYDSSWIKMFEDWEEESLYFLTRLRNWSTQKSGSSSRDAPFLEELKKEDNKLEGSEMLLDYNLEVDINYDCLPYFLKDKDLDDFSFLSSPSLDKKDVITQKKSTSVAGNIVLAAAYTHWLPRYGLKVVLQTILQAFLEGFSVEPYGTRRPSCAILDVGLSKITTVHCHCARPFTMKYLGSHTILFIALSFLYVPIISSSTTSNHVSDVVKIHALVAFLASFNVLLTFLPHFRERRKEKIWQKGKDKIEEKQD 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1278 295 Gene3D NAC domain 14 91 IPR036093 GO:0003677|GO:0006355
Lele02g1278 295 Pfam No apical meristem (NAM) protein 6 80 IPR003441 GO:0003677|GO:0006355
Lele02g1278 295 PANTHER NAC TRANSCRIPTION FACTOR 56 5 72 - -
Lele02g1278 295 SUPERFAMILY NAC domain 3 69 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1278 Lele-ChrLele02 16870595 16873264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1278 138 207 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 39.175 5.19e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele02g1278 NAM 9.4e-09 No_clan