Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1250 ATGGAAATCTCTAGCACCTATAATGGCGGTGGCATGATGTGGTTTTTTAAGGATAGAGGATTTGATGATAAAAGCATACAAGGAATGTTCAGGAAGTGCAAGCGCCTTGAGGTTGTGCATGAAGAAAGGGCATCTGAGAATTGGACCTATTTGACAAGCATTGGCATTCAAGAGAGGAAACTCCCATCAATTGTTTCAAAATGTCCGAAGATACTTACGCTTGGCCTTAATGAGAAGATAGTTCCCATGGTTGAATGCCTCAAGACACTGGGAACAAAACCCAATGAAGTTGCTTCTGCCATATCCAAGTTCCCTCATTTACTCTCACATAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCCTTCTTTCAGGCATTGGGCATCCCCGAAAAGCGACTTGGAAAAATAATACTGCTCAATCCAAGGCTTATTAGCTACAGCATCGAAACAAAGCTCACAGAAATTGTGGACTTCCTTGCTAGCCTTGGTCTTAATAAAGAAGGAATGATTGGAAAAATTTTAGTGAGGAACCCATGTATTATGGGGTATAGCGTCGATAAAAGACTCCGCCCTACTACTCAGTTTCTGAAGTCAATAGGTCTGGTTGATCTCGAACTTCAAGTGGTAGCTGTGAACTTCCCAGAAGTCTTGAGTAGAGATGTGAACAGGGTTTTGGAGCCCAATTATGCATACTTGAAGAGATGTGGATTTCAAGATAGACAGATCGTTGCTTTGGTAGTTGGATTTCCTCCAATCCTGTTCAAGAGCATCCAAAATTCTTTAGAACCCAAGATAAGGTTTCTTGTAGATGTGATGGGGAGACAAATCCATGAAGTTGTTGATTATCCTGGCTTCTTTGGTCATGGTCTGAAGAGAGAAATTGAGTTGCGGCACAAAATTTTAAAGAAGAGGACCTTAGATTGTAGCTTGAGTGAAATGCTTGACTGTAATAAGAAGAAGTTCTTCTTAAAATTTGGTTTATTAGAAGGTCATGTGTTGAGTAACAAGGTTTCATCCCCCTTATAA 1026 0.4064 MEISSTYNGGGMMWFFKDRGFDDKSIQGMFRKCKRLEVVHEERASENWTYLTSIGIQERKLPSIVSKCPKILTLGLNEKIVPMVECLKTLGTKPNEVASAISKFPHLLSHSVEEKLCPLLAFFQALGIPEKRLGKIILLNPRLISYSIETKLTEIVDFLASLGLNKEGMIGKILVRNPCIMGYSVDKRLRPTTQFLKSIGLVDLELQVVAVNFPEVLSRDVNRVLEPNYAYLKRCGFQDRQIVALVVGFPPILFKSIQNSLEPKIRFLVDVMGRQIHEVVDYPGFFGHGLKREIELRHKILKKRTLDCSLSEMLDCNKKKFFLKFGLLEGHVLSNKVSSPL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1250 341 Gene3D Transcription termination factor 3, mitochondrial 91 329 IPR038538 -
Lele02g1250 341 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 Pfam mTERF 15 122 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 Pfam mTERF 111 321 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 PANTHER CGI-12 PROTEIN-RELATED 133 254 IPR003690 GO:0003690|GO:0006355
Lele02g1250 341 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1250 Lele-ChrLele02 14668991 14670016 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele02g1250 mTERF 1.4e-58 No_clan