Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1237 ATGGGATATATGTGTGACTTCTGTGGAGAACAGAGGTCCATGGTGTATTGCCGTTCCGATGCTGCATGCTTGTGTTTGTCATGTGATCGAAATGTTCATTCCGCTAATGCCCTTTCGAGACGCCATTCGAGAACCTTAGTATGTGAGAGATGCAATTCACAACCTGCCCATGTAAGGTGTACCGAAGAGAGGATTTCACTATGTCAGAATTGTGATTGGGTGGGTCACAGTGCTTCCACGTCTTTGTCAACACATAAGAGGCAAACTATCAATTGCTATTCGGGTTGCCCCTCGGCTGCAGAACTTTATTCAATATGGTCATTTGTCTTGGACATTCCAACCATTGGTGAATCTTCATGTGAGCAAGAACTAGGTATGATGAGTATTAATGACAACAGCAACAGGAACGCTTGGGTCCCCACAGAAAGTCAGAATGCATCTGGTTCGGCTCAAGTAGTTGATATGCATGGCATGGATAAGTCTTGTGTCGGGCAATCTTCAATGCGTGAGTCTAGCAAAGAGCCTATTACTCTAGACCACACAACTGGACCTGCCAATGAAAGTCTATCCAAGTTATACTGTCCCGGTACAAAAGGTTCTGGACTATATGAAGATGATGATAACCTGTTTGGTGACTTCGACATGGATGAAGTGGATCTGAATCTTGATAACTATGAGGAACTTTTTGATGTGGCTCTTAGTCATTCTGAAGAGCTTTTTGAAAATGGCGGGTTTGATAGTTTGTTCGGGATAAAGGAAACGTCTGCCAGTGATTCCAACCATCAGGCTGATGCTGAGGGGTCAGTTGGACTTGTCAACACAGTGCATCCAGCATGCAGCAATGCGGCATCTGCAGATTCCATGTTAAGTACAAAAACGGAACCTATTCCCCGTTTTACTGGAAAGCAATCGCAATCAAACCTTTCATTTTCTGGTGTTACTGGAGAGAGCAGTGGTGCTGACTATCAAGATTGCGGTGCTTCTTCAATGCTTCTCACGGGGGAGCCTCCATGGTGCCCTCCATGCCCCGAAAATTCCATGAAAACTTCCAACCGCAGTGATGCTGTCATGCGTTACAAAGAAAAGAAGAAGACACGCAAGTTTGACAAAAGAGTGAGGTATGCCTCTCGCAAGGCAAGGGCCGATGTTCGAAGGCGTGTGAAGGGCCGGTTTGTTAAAGCCGGCGAAGCCTATGATTACGATCCTCTGAATCCAACCAGAAGCTGCTGA 1230 0.4577 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPAHVRCTEERISLCQNCDWVGHSASTSLSTHKRQTINCYSGCPSAAELYSIWSFVLDIPTIGESSCEQELGMMSINDNSNRNAWVPTESQNASGSAQVVDMHGMDKSCVGQSSMRESSKEPITLDHTTGPANESLSKLYCPGTKGSGLYEDDDNLFGDFDMDEVDLNLDNYEELFDVALSHSEELFENGGFDSLFGIKETSASDSNHQADAEGSVGLVNTVHPACSNAASADSMLSTKTEPIPRFTGKQSQSNLSFSGVTGESSGADYQDCGASSMLLTGEPPWCPPCPENSMKTSNRSDAVMRYKEKKKTRKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLNPTRSC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1237 409 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 397 - -
Lele02g1237 409 Pfam CCT motif 352 394 IPR010402 GO:0005515
Lele02g1237 409 CDD Bbox1_BBX-like 5 47 - -
Lele02g1237 409 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Lele02g1237 409 CDD Bbox1_BBX-like 47 90 - -
Lele02g1237 409 ProSiteProfiles CCT domain profile. 352 394 IPR010402 GO:0005515
Lele02g1237 409 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lele02g1237 409 SMART bboxneu5 48 90 IPR000315 GO:0008270
Lele02g1237 409 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1237 Lele-ChrLele02 14327178 14331317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1237 1 408 C2C2-CO-like Transcription Factor Family AT3G07650 59.145 1.96e-156 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele02g1237 zf-B_box 3.3e-05 No_clan