Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1204 ATGGGCCGCTCTCGCGCCGCTTCGCGCCAACCTGACGATGACCCCAGCCAAAGATCCAAGAGGAAAAAGGCAGCTTTGAATGCAGAGAATTCAGAAATTTTAAGTATAGGCCATGGAATAAATGAGGGGAAAGTATCTCTTTACCACTGTAATTATTGCAACAAAGATATTTCCGGGAAGATCCGCTTGAAGTGTGCTGTATGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTCGGTTGGAGCTGAGGTGACACCTCACAAAAGCAATCATCCATATCGGGTTATGGATAATCTATCTTTTCCGCTGCTATGTCCAGACTGGAATGCAGATGAAGAGATGCTGCTTCTAGAGGGCATTGGAATGTATGGATTTGGCAGTTGGGCTGAAGTGGCAGGATGTGTTGGAACAAAACGCAAGTCTGAATGTATTGACCACTATAATGCTTTTTACATGAATTCACCATGCTTTCCTCTCCCTGATTTGTCTCGTGTCATGGGAAAGAGCAAAGAGGAGCTCCTTGCCATGGCCAAAGAGTATAGCGATGTTAAAAAAGAACTTTCTCCAAAAGCAGAGCTTACACTGAAAGAAGAGCCTCACTTTTCTGCAGGAATAAACTCAGAGGAATCTAAAAGGGAAGAACCCGCTAACCAAACATTGTCTAGCATAACTTCAGGTGCTGCTATGGGCACAGTTCCTGCCAAAGCTTATTCAAGTTCGTTTAAGAAGGCTTCCAATGCTAACCAGATTAATAACAGGATTAAAATGGAAGATCGAAGCATTAGAGAGAAAAAACCCAAGTTATCTGGGGAAGATGGGCCTTCTGTGATGGAATTGAGTGGATACAATTTTAGGAGAGAAGAATTTGAGATTGAATATGACAATGATGCAGAACAAGTATTAGCAGATATGGAATTTAAGGACACCGATACTGAAGCTGAACGTTTATTAAAACTACAAGTGCTCCATATATACTCCAAAAGGTTAGATGAACGAAAACGGAGAAAGAATTTTATCCTTGAAAGAAATTTGCTTTATGCTGACCCCTTTGAGAAATCTCTTACACCTGAAGAGCTACAAATGTGTCAGCCCTATAGGGTCTTCATGCGGTTTCACTCAAAGGAAGAGCACAAGGAGTTTCTCAAAAGTATTATTGAAGAACATCGTATTGTCAAGAGAATACAAGATCTCCAGGAAGCTCGAGCTGCTGGCTGTCGATTATCTGCCGATGCATATAGATTTATTGATCTCAAGAGGACAAAGGATGCTGAACAAAGTGCCTATAAAGAAAGTGAGAAGGATTCACCTGCCACAATACAGGCATTCTCGAAATCCCTAGATGATTGGGATGTCTCTGGAATTAGGGGCGCTGAGTTACTATCAGAATCTGAGAAAGAGCTATGTGATGAGATTAGAATTCTACCGTCACACTATCTCAACATGTTGCAGATCATGACACTAGAAATTTCTAAGGGTAATGTAACCAAGAAATCTGATGCATATACCTTGTTCAATGTAGAACCCAGTAAGGTTGATAGAGTTTATGATATGCTTGTGAAAAAGGGGATTGCTCCAACTTAG 1581 0.4118 MGRSRAASRQPDDDPSQRSKRKKAALNAENSEILSIGHGINEGKVSLYHCNYCNKDISGKIRLKCAVCQDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLLCPDWNADEEMLLLEGIGMYGFGSWAEVAGCVGTKRKSECIDHYNAFYMNSPCFPLPDLSRVMGKSKEELLAMAKEYSDVKKELSPKAELTLKEEPHFSAGINSEESKREEPANQTLSSITSGAAMGTVPAKAYSSSFKKASNANQINNRIKMEDRSIREKKPKLSGEDGPSVMELSGYNFRREEFEIEYDNDAEQVLADMEFKDTDTEAERLLKLQVLHIYSKRLDERKRRKNFILERNLLYADPFEKSLTPEELQMCQPYRVFMRFHSKEEHKEFLKSIIEEHRIVKRIQDLQEARAAGCRLSADAYRFIDLKRTKDAEQSAYKESEKDSPATIQAFSKSLDDWDVSGIRGAELLSESEKELCDEIRILPSHYLNMLQIMTLEISKGNVTKKSDAYTLFNVEPSKVDRVYDMLVKKGIAPT 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1204 526 SUPERFAMILY Homeodomain-like 442 523 IPR009057 -
Lele02g1204 526 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Lele02g1204 526 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Lele02g1204 526 SMART sant 104 153 IPR001005 -
Lele02g1204 526 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Lele02g1204 526 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Lele02g1204 526 Pfam Myb-like DNA-binding domain 107 148 IPR001005 -
Lele02g1204 526 ProSiteProfiles SWIRM domain profile. 440 526 IPR007526 GO:0005515
Lele02g1204 526 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Lele02g1204 526 FunFam Transcriptional adapter 2 441 525 - -
Lele02g1204 526 Gene3D - 42 96 IPR043145 -
Lele02g1204 526 CDD SANT 108 148 IPR001005 -
Lele02g1204 526 SUPERFAMILY RING/U-box 48 111 - -
Lele02g1204 526 SMART zz_5 44 89 IPR000433 GO:0008270
Lele02g1204 526 MobiDBLite consensus disorder prediction 198 225 - -
Lele02g1204 526 MobiDBLite consensus disorder prediction 198 215 - -
Lele02g1204 526 FunFam Transcriptional adapter 2 101 153 - -
Lele02g1204 526 Gene3D - 103 153 - -
Lele02g1204 526 PIRSF Txn_adaptor_ADA2 430 525 IPR016827 GO:0003713|GO:0006357|GO:0035065
Lele02g1204 526 PIRSF Txn_adaptor_ADA2 37 445 IPR016827 GO:0003713|GO:0006357|GO:0035065
Lele02g1204 526 MobiDBLite consensus disorder prediction 255 271 - -
Lele02g1204 526 Gene3D - 440 524 IPR036388 -
Lele02g1204 526 CDD ZZ_ADA2 48 96 IPR041983 -
Lele02g1204 526 FunFam Transcriptional adapter 41 96 - -
Lele02g1204 526 MobiDBLite consensus disorder prediction 248 275 - -
Lele02g1204 526 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Lele02g1204 526 MobiDBLite consensus disorder prediction 1 26 - -
Lele02g1204 526 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 48 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1204 Lele-ChrLele02 13097291 13124859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1204 1 524 EF-hand Containing Proteins AT3G07740 54.174 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele02g1204 Myb_DNA-binding 2.5e-08 CL0123