Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1198 ATGAATGGTAGTTTAGCTGGAATAGTAAGGAGATCTTTACCGCTGCTTCCTCTGTCTCGCTGCCGTGGTTTAGCTTCTTCCACAGTTTTTTTGATTTCCATGATTAGATGGTGTCGCAAAATAAGTACCCCATCGTCAATTGCTGAGTTGGTTCTCATGGACAAAACAAGTGAAGATACATCGAAAGAACCTCTGCGTGAATATGAAGTTAAAGAAGACCAAACTTTCGAAGAGTTAGGACTGGATGCACGCCTAATTCGTGCCTTACTCAACAAGGGAGTCGAGAAACCAACTCCAATTCAACAGGTGGCTATTCCACTGATATTGGAAGGTAAGGATGTGGTTGCTCGAGCAAAGATAGGTTATGGCAAGACATTTGCATACCTTCTTCCATTGCTTCAAAAATTATTTACTAATAATGTTCAAAGAAAGAAGCTATCCCCCAATGCATTCATTCTTGTGCCCACTCGAGAATTGTGTCAACAGGTATATGCAGAGGTTTCATCTTTCATAGAATTATGCAGAGTTCAATTGAAACCTGTGCAATTGACAGGCAATATGAAGGCTTCTGATCTGTGCCAATTTGCTAAATGCTTGTCCGCTGGCATACTTAAATCAACATCCTTTAATGGTTCCCTTGAAACTCTAATGTCATGCCGTGCCAGTGATAAGTTACTTTACACGCTTGCCTTGTTGAAGTTAGAGTTGGTCCAAAAGAAAGTTCTAATATTTATCAATACCATAGACATGAGTTTCAGATTGAAACTGTTCTTGGAAAAGTTTGGAATTAAGTCTGCTGTTTTAAATGCTGAGTTGCCACAGAATTCCCGTCTCCATATTCTTGAGGAATTCAATGCTGGCCTCTTTGATTATCTTATTGCAACTGATGGCAGCTACACAAAGGAGAAGAATGAAGCAACGAAAGAAAATAATGGAGAGTTGTGGCGGTCCAAAAAACATGTCAAGCAAAAATTAGATTCTGAATTTGGAGTTGAGGGGAATCGACTTGAAAAATGTATACACGTGTTGCAGGATACGTCCATGGAATAG 1050 0.3971 MNGSLAGIVRRSLPLLPLSRCRGLASSTVFLISMIRWCRKISTPSSIAELVLMDKTSEDTSKEPLREYEVKEDQTFEELGLDARLIRALLNKGVEKPTPIQQVAIPLILEGKDVVARAKIGYGKTFAYLLPLLQKLFTNNVQRKKLSPNAFILVPTRELCQQVYAEVSSFIELCRVQLKPVQLTGNMKASDLCQFAKCLSAGILKSTSFNGSLETLMSCRASDKLLYTLALLKLELVQKKVLIFINTIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSYTKEKNEATKENNGELWRSKKHVKQKLDSEFGVEGNRLEKCIHVLQDTSME 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1198 349 SMART ultradead3 93 281 IPR014001 -
Lele02g1198 349 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 105 193 IPR014001 -
Lele02g1198 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 296 IPR027417 -
Lele02g1198 349 Pfam Helicase conserved C-terminal domain 223 296 IPR001650 -
Lele02g1198 349 Pfam DEAD/DEAH box helicase 98 192 IPR011545 GO:0003676|GO:0005524
Lele02g1198 349 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 74 102 IPR014014 GO:0003724
Lele02g1198 349 Gene3D - 44 214 IPR027417 -
Lele02g1198 349 Gene3D - 215 299 IPR027417 -
Lele02g1198 349 PANTHER RNA HELICASE 173 297 - -
Lele02g1198 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 192 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1198 Lele-ChrLele02 12170332 12176600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1198 75 162 Eukaryotic Initiation Factors Gene Family AT3G19760 38.636 2.74e-11 62.4