Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1189 ATGGATACAACTATACCGCCTGGCTTCAAGTTTAACCCGACAGATCAAGAACTGATTTGGCATTACTTGTACAAGAAGGCTAATGGCAAACCCCTCCCTTGTAATGCAATTATTGATTGTGACATTTATGGAGGTGACGGTTCTTGGAGGAAGATGTTTGAGGATCGGGAAGAGGAATCTCTTTACTTCTTCACTAGATTAAGAAACTTGAGAACCCAAAGAAATGGTTCTTCTTCAAGGGTTTTGAGAGCCACAAAGTTTGGTACTTGGAAGTGTCAATCTGACATGAAAATTTATGCTGGGAAGAAGCATATCGGGTCCAAGAGGACCTTCTCCTTCATAGAGAAGAAGAAGGAAGAAGAAGAAGAGCCCATGAAAAAAGGATCCAAGAAGACAAATGGTTGGACAATGCACGAGTACAGAATTGATGGTTGTCTTATGCATCAAAAGGAACAAAGTTCTTCGGATTATGGGTACGTGGTATCCAGGATCAGCAGGCCAAGACACATGAGGAGAGATGAAGGAGAATCAATCCGTTCTCAGATTGAGTGTGAACAGGAGGCTGCATTTCCTGAAGAGTCAAAGCAAGACAACAACAAATTTGAGGGTGCTGAGATTCTTCCTGATTATAATCTTAAGGTAGATATAAATTTTGAATGGTTATCATATTTTCTTGAAGACAAGGATCTAGATGATTTTTCCTTTCTTTCATCAACAAGTTTAGGATGTTATTGCACACAAAAAAAATCTGCTAGTGCTGCTGTCAATATTGTTCTTGCTGCTGCATATGCACATGAGTTGCCATGCTATGGTCTCGAAGCAGTGCTACAAACTAAGCTGCAGGTTTCTGATGCTGTCCAACTGGAGAGAATACTTCGTGCAATATATGGCATTGAGTACATCTTCGTTGAAGACCAATTTGCTAGGCTTGTTTGTTTGGTTTTCTTTTGTGGATTACAAGAATATTCATTGCTTTGTCTTTTGCTTTTTCCATTCCTCTTCCTTGTACTTTGCTCTGTTTCGTCTTCCACAACTGGCAACTGTGTCTTTGGTGCCCATAAGCTTGGCTTTGTATCATTGTTTTTGTAA 1089 0.3994 MDTTIPPGFKFNPTDQELIWHYLYKKANGKPLPCNAIIDCDIYGGDGSWRKMFEDREEESLYFFTRLRNLRTQRNGSSSRVLRATKFGTWKCQSDMKIYAGKKHIGSKRTFSFIEKKKEEEEEPMKKGSKKTNGWTMHEYRIDGCLMHQKEQSSSDYGYVVSRISRPRHMRRDEGESIRSQIECEQEAAFPEESKQDNNKFEGAEILPDYNLKVDINFEWLSYFLEDKDLDDFSFLSSTSLGCYCTQKKSASAAVNIVLAAAYAHELPCYGLEAVLQTKLQVSDAVQLERILRAIYGIEYIFVEDQFARLVCLVFFCGLQEYSLLCLLLFPFLFLVLCSVSSSTTGNCVFGAHKLGFVSLFL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1189 362 Pfam No apical meristem (NAM) protein 6 142 IPR003441 GO:0003677|GO:0006355
Lele02g1189 362 Gene3D NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
Lele02g1189 362 ProSiteProfiles NAC domain profile. 5 167 IPR003441 GO:0003677|GO:0006355
Lele02g1189 362 PANTHER NAC TRANSCRIPTION FACTOR 56 5 188 - -
Lele02g1189 362 SUPERFAMILY NAC domain 4 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1189 Lele-ChrLele02 11105762 11108809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1189 5 164 NAC Transcription Factor Family AT5G07680 33.333 2.11e-18 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele02g1189 NAM 2.9e-23 No_clan