Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1183 ATGTTTGAAGATCTGGAAGAGGAATCTCTTTACTTCGTCACTAGAATAAGAAACTGGAGCACCCAAAAGAGTGGTTCTTCTTCAAGGGTCATGAGAGCCACAAAGTTTGGTACTTGGAAGTATCAATCTGACATGAAAATTTATGCTGGGAAGAAGCATATTGGGTCTAAGAGGACCTTCTCCTTCGTGGAGAAGAAGAAGAAGAAGGACAGAGAGCCAGAGAAAAAAGGATCCAAGAAGGCAACTGGTTGGACAATGCGCGAGTACAGACTTGATGGTTGTCTTATGCATCAAAAGGAACAAAGTTCTTCAGATTATGGCCATGTGGTCTATAGGATCACCAGGCCAAGACACATGAAGAGAGATGAATGA 372 0.4247 MFEDLEEESLYFVTRIRNWSTQKSGSSSRVMRATKFGTWKYQSDMKIYAGKKHIGSKRTFSFVEKKKKKDREPEKKGSKKATGWTMREYRLDGCLMHQKEQSSSDYGHVVYRITRPRHMKRDE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1183 123 ProSiteProfiles NAC domain profile. 1 116 IPR003441 GO:0003677|GO:0006355
Lele02g1183 123 MobiDBLite consensus disorder prediction 62 82 - -
Lele02g1183 123 Pfam No apical meristem (NAM) protein 6 91 IPR003441 GO:0003677|GO:0006355
Lele02g1183 123 SUPERFAMILY NAC domain 8 114 IPR036093 GO:0003677|GO:0006355
Lele02g1183 123 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 116 - -
Lele02g1183 123 Gene3D NAC domain 2 120 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1183 Lele-ChrLele02 10652779 10653150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1183 6 113 NAC Transcription Factor Family AT5G07680 34.862 1.93e-07 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele02g1183 NAM 1.3e-07 No_clan