Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1176 ATGCCTAATTCGTGCCTTACTCAAAAAGGGACTCGAGAAACCAACTCCAATTCAACAGGTGGCTTTTCCACTGATATTGGTAAGGATGTGGTTGCTCGAGCAAAGACAGGTTCTGGCAAGACATTTGCATACCTTCTTCCATTGCTTCAAAAATTATTTACTAATAATGTTCAAAGAAAGAAACTATCTCCCAATGCATTCATTCTTGTGCCCACTCGAGAACTGTGTCAACAGGTATATGCAGAGGTTTCATCTTTCATAGAATTATGCAGAGTTCAACTGAAACATGTGCAATTGACAAGCAATATGAAGCCTTCTGATCTGGTTGTGGATGACTTCCTTTTTTCTCTAAATCGGTTGCACCGAACAGCAATGACTGGACCACCTGATGTTTTGATTTCCACACCTGCTTGTATTGCTAAATGCTTGTCCGCTGGCATACTTAAATCAACATCCTTTAATGGTTCCCTTGAAACTCTAGTTCTCGATGAGGCAGATCTTCTATTGTCATACGGCTATGAAAATGATAGAAAAGCCTTTTCAGCTCATGTACCCAGAAGTTGCCAGTGTCTTCTTATGTCCGCAACATCAAGGAATTCAATGCTGGCCTCTTTGATTATCTTATTGCAACTGATGGCAGCTACACAAAGGAGAAGGATGAAGCAACGAAAGAAAATAATGGAGTTGTGGCGGTCCAAAAAACATGTCAAGCAAAAATTAGATTCTGAATTTGGAGTTGAGGGGAATCGACTTGAAAAATGTATACACGATGAAATAAGATCTTTTGTTGGGGATGATGTAAACAATGGTTCAAACACAATTGCTGAATTTCCATTGCTTACCAAGAATGCTGTGGAATCTTTACGGTTGAGGGCACACTTTGAATCTAATCCGAGGGACCTAGAACTATTGAATCATGCCAAAGTTTTGAGCAAAAATGCCCCTCCAGCACACCTACGTGATGTGCCTGACTATTTAGTAGATAAAACAACCAAAGAGGCAAGGGAAATGGTGAAGCTTGCAAAGGATGCAATGGGAAATAATAATCGCTCATGA 1056 0.4015 MPNSCLTQKGTRETNSNSTGGFSTDIGKDVVARAKTGSGKTFAYLLPLLQKLFTNNVQRKKLSPNAFILVPTRELCQQVYAEVSSFIELCRVQLKHVQLTSNMKPSDLVVDDFLFSLNRLHRTAMTGPPDVLISTPACIAKCLSAGILKSTSFNGSLETLVLDEADLLLSYGYENDRKAFSAHVPRSCQCLLMSATSRNSMLASLIILLQLMAATQRRRMKQRKKIMELWRSKKHVKQKLDSEFGVEGNRLEKCIHDEIRSFVGDDVNNGSNTIAEFPLLTKNAVESLRLRAHFESNPRDLELLNHAKVLSKNAPPAHLRDVPDYLVDKTTKEAREMVKLAKDAMGNNNRS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1176 351 Gene3D - 8 212 IPR027417 -
Lele02g1176 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 201 IPR027417 -
Lele02g1176 351 PANTHER RNA HELICASE 28 226 - -
Lele02g1176 351 Pfam DEAD/DEAH box helicase 27 198 IPR011545 GO:0003676|GO:0005524
Lele02g1176 351 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 21 215 IPR014001 -
Lele02g1176 351 SMART ultradead3 9 223 IPR014001 -
Lele02g1176 351 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1176 Lele-ChrLele02 9888420 9896158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1176 27 196 Eukaryotic Initiation Factors Gene Family AT1G72730 25.882 1.28e-07 51.2