Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1135 ATGGTTCTGTCCAAGACAGCTTCTCAGACGGACGTTTCCGTCCACTCGACTTTCGCGTCGCGCTACGTGAGAGCGCCGCTTCCCAGGTTCAAGATGGCCGAGCATTCCATCCCAAAGGAGGCGGCGTTCCAGATCATCAACGACGAGCTCATGCTCGACGGTAATCCCAGGCTCAACCTCGCCTCCTTTGTCACCACCTGGATGGAGCCCGAGTGCGACAAGCTCATCATGTCCTCCATCAACAAGAATTACGTCGACATGGACGAGTATCCCGTCACCACCGAGCTTCAGAATCGGTGTGTGAACATGATCGCCCATCTTTTCAATGCGCCACTTCAAGATTCAGAGCCCGCCGTCGGTGTCGGCACGGTTGGCTCATCGGAGGCCATCATGTTGGCTGGGTTGGCTTTCAAAAGAAAGTGGCAGAACAGAAGAAGAGAAGAGGGCAAGCCTATCGACAACCCCAATATTGTCACTGGTGCTAATGTTCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTTGAGGTGGAGCTCAAAGAGGTGAAGCTGAGGGAAGATTACTTCGTCATGGATCCTGAAAAGGCAGTGGAAATGGTAGATGAAAACACCATCTGTGTTGCTGCTATCCTCGGTTCCACCCTCAATGGAGAATTCGAAGATGTCAAACGCTTAAATGATCTCCTGATTGAGAAGAACAATGAAACTGGATGGGATACTCCAATTCATGTGGATGCAGCGAGTGGTGGATTCATTGCACCATTTATATATCCAGACCTTGAATGGGACTTTCGCTTGCCACTTGTGAAGAGCATCAACGTTAGTGGACACAAGTATGGTCTTGTGTATGCTGGCATTGGTTGGGTCATCTGGAGAAGTAAGGAAGATTTGCCTGAAGAACTCATCTTCCACATTAACTACCTCGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCCCAGTACTACCAGCTTATCCGCTTAGGCTATGAGGGGTATAGGAATGTGATGGAGAATTGCAGAGACAACATGATAGTGCTGAAAGAGGGGTTGGAGAAAACAGGGCGCTTTAGCATCGTATCAAAGGACGACGGAGTGCCATTGGTGGCCTTCACCTTGAAGGATCACAGCCACTTTAATGAATTCCAGGTCTCTGATTTCTTGAAGCGCTATGGCTGGATCGTGCCGGCCTACACTATGCCTCCTGATGCCCAGAGCGTCACCGTCCTCCGTGTCGTCATCAGAGAGGACTTCTCCCGAACATTTGCTGAGCGTCTCGTCATTGATATCCAGAAAGTCTTGCACGAGCTCGATTTGCTTCCCGGCCGGCCCATCAAGAGCACGACCGTCAGCGTCACTGCAGAGATGGCAGAAAACGGCAATCTCGTCCCCAAGAAGAGCGAACTGGAGACCCAAAGGGAAATCACTACGGCCTGGAGGAAGTTCGTGTCCGACAGGAAGAAGATGAACGAGAAGATGAACGCTTCTTGGGTAACCATCCTTGATGACGACAAGCTCATTGTTGCAGTCAAAACATCAAAAGTTCAAAAAGCCCATCCACCACAAGCCCCCATGATCACTCCCCCAAGTGTACCACGCTTGCGAAGAATGAGATCGAGATTCTCTCCAGAGTCCCAAGCTCTGCATCATCAACCTCACAAGCTTCTGCATGTACTTAAACCTCGATTTGATTCCTTCACTCTGCCCTCGTGGAGGTTGCCCAAGAAACTATCTTCCGAGAACCCTTTTGTGGCTGCCACCAGTGATTCCCTTACAGAATTGTCTTCTATTGTGCTTATCTACAGTTTCGGCTCATTTGGCCACTTGATTTTTCTCGGTCTGCGTGCTCTTCTTGGTGTGAGGATTGTGGTGAGACCTGGCATTTGCGAGGACGAAGGAGAAGCAACTGCAAATACGGGTTTACATCATCAGTTCCTCCGGGCCTCGTCGTGTTCTATCTATTGTTGGGTAGTGCAGGACTTCAAGGTTAGGCTTAGTGGGGAAGGACTTCATGACAAGTACCATATCATGGTTTTGTCTTCTACAATAGTGATAGAGTGTTTTGAGTACATTCCTTTTCATGGGTTCATGCTGAAGGATATGGCTGATATCAGGAGTGAGTACCATCCTCCTTGTAGGGTGAGAAGTAATGGTTTTATGCCTTATTTTATGTGGGAAAAAAGGATTGTTGTGGACCTTTATGGTAGTCCTACTAAAGAGGTATGGAAGGACTTCTTGCATGTTAAGAATATGATTCATATGCTAGTGCTTAAACAGTATGCATTAGTCAAGAAGGAAACAAGTAATGTCTCTTTGGTGAACTACTTCTCTGATACTAGGGTGTTTTGGAATGCCACCTTGAACTAA 2388 0.482 MVLSKTASQTDVSVHSTFASRYVRAPLPRFKMAEHSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLQDSEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRREEGKPIDNPNIVTGANVQVCWEKFARYFEVELKEVKLREDYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNNETGWDTPIHVDAASGGFIAPFIYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMIVLKEGLEKTGRFSIVSKDDGVPLVAFTLKDHSHFNEFQVSDFLKRYGWIVPAYTMPPDAQSVTVLRVVIREDFSRTFAERLVIDIQKVLHELDLLPGRPIKSTTVSVTAEMAENGNLVPKKSELETQREITTAWRKFVSDRKKMNEKMNASWVTILDDDKLIVAVKTSKVQKAHPPQAPMITPPSVPRLRRMRSRFSPESQALHHQPHKLLHVLKPRFDSFTLPSWRLPKKLSSENPFVAATSDSLTELSSIVLIYSFGSFGHLIFLGLRALLGVRIVVRPGICEDEGEATANTGLHHQFLRASSCSIYCWVVQDFKVRLSGEGLHDKYHIMVLSSTIVIECFEYIPFHGFMLKDMADIRSEYHPPCRVRSNGFMPYFMWEKRIVVDLYGSPTKEVWKDFLHVKNMIHMLVLKQYALVKKETSNVSLVNYFSDTRVFWNATLN 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1135 795 FunFam Glutamate decarboxylase 66 360 - -
Lele02g1135 795 Gene3D - 66 360 IPR015421 GO:0003824
Lele02g1135 795 Gene3D - 1 65 - -
Lele02g1135 795 FunFam Glutamate decarboxylase 361 448 - -
Lele02g1135 795 CDD DOPA_deC_like 59 439 - -
Lele02g1135 795 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele02g1135 795 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Lele02g1135 795 PANTHER GLUTAMATE DECARBOXYLASE 1 495 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele02g1135 795 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele02g1135 795 FunFam Glutamate decarboxylase 1 65 - -
Lele02g1135 795 Gene3D - 361 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1135 Lele-ChrLele02 7271917 7282026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1135 1 495 Calmodulin-binding Proteins AT5G17330 83.099 0.0 871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1328 25 9083100 9083915 Lele02g1135 02 7271917 7282026 CCT
Lele02g1135 02 7271917 7282026 Lele03g1104 03 6447188 6449111 hybridization
Lele02g1135 02 7271917 7282026 Lele04g1120 04 7065985 7067950 hybridization