Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1130 ATGGGGGTCACGCTAACAAGTTATTTTCCCGGAAAACTGTTCCGGCCTCTTCTTTGGTCTGATTTTCTAGGCTCTATGGCTATTCAAGTATGTATTACTGGAGTTTCTGCTTTGCAATTTTTTGTTTTGCTAAATATCTCTCGGTTGATTCTGTGGTCTCAGTTTTCTTGCTGTGGACAGGATCATAATGAAGTTTCTAGATATAATGGTCTTCCACTAGAAACTGCAGTATCTCTGAGTTCTGGACTACGTTCTGCTTCACCTGTTCAACTAAAGGATCAGATTTCTACTGGGAAAGAGCGTGCTCCAAAGGTAAGGAAACCATACACCATCACGAAGCAGAGGGAGCGATGGACTGATGAAGAACACAAGAAATTCATCGAAGCTCTGAAACTCCATGGCAGGGCATGGCGAAAGATTGAAGAACATGTTGGCACAAAGACTGCAGTTCAGATCCGAAGCCATGCTCAGAAGTATTTCACAAAGGTTCTTCGTGAGTCTACTGGGATCTGCATAAGCTCAGAGGATTCCGTTGAAATCCCACCTCCTCGACCAAAGCGAAAGCCTTCTCATCCTTATCCTCGTAAGCTGGTCGAGTTCCCTGAGAAAGAAATCTCCAACACAGGTCAGCCATTGAGGTCTAATTCTCTCAAGTCATCAGAATCTGATCAAGAAAACCAGTCTCCAAAATCAGTGTTATCTACTGTTGGTTTAGACACTCTCCTATCCCTTGATTCATATAAACCAAATGGAAGTCCTTTTGAGGAAGATGGTTCTGCCCCGAATGCTGATTCATCTCCTGATCTGCAAACTCCTCTGAAATTTGAGCTTCCCCCTAAAGAGAGTGTTTCTACCAAAGAACCTTGTGGTCGGGTTGTTAAGCTTTTTGGGACGAATCTTCTGGCAAAAAATAGCTGCCCAACAAAGAAGAATTCTTCAGATATAGCAGAAACTCCTACTGGTTTTGCTCCTTGGAGGGCTCTTTCCTACAATAGGGAAGTTGAAGATAATAATAAAGTTGAAAACGAAGTATATTGGTGTGGTTCAAACATTACAAGCTCAATATATGAAGGGGACAACAATAATGATGAAAACCCAGATGTTGAAGCCAGATCAAGTCACATGCATTGCTACAGAAAGGTTTCAGAAAAAATGAGTCTTTTTGGTTGCTACATGACAACACCCACAAACCCATCAACCATATCTGAATTATTGGAGAGGCCAAAAGGGTTTGTACCATATAAGAAATTCATAGCACAGAGAGAAAATCAGCCCTTGCCAGTAACAATGAAGGAGAGAGATGGCCAACGCATTCGCCTTTCATTATAG 1329 0.4199 MGVTLTSYFPGKLFRPLLWSDFLGSMAIQVCITGVSALQFFVLLNISRLILWSQFSCCGQDHNEVSRYNGLPLETAVSLSSGLRSASPVQLKDQISTGKERAPKVRKPYTITKQRERWTDEEHKKFIEALKLHGRAWRKIEEHVGTKTAVQIRSHAQKYFTKVLRESTGICISSEDSVEIPPPRPKRKPSHPYPRKLVEFPEKEISNTGQPLRSNSLKSSESDQENQSPKSVLSTVGLDTLLSLDSYKPNGSPFEEDGSAPNADSSPDLQTPLKFELPPKESVSTKEPCGRVVKLFGTNLLAKNSCPTKKNSSDIAETPTGFAPWRALSYNREVEDNNKVENEVYWCGSNITSSIYEGDNNNDENPDVEARSSHMHCYRKVSEKMSLFGCYMTTPTNPSTISELLERPKGFVPYKKFIAQRENQPLPVTMKERDGQRIRLSL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1130 442 MobiDBLite consensus disorder prediction 175 232 - -
Lele02g1130 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 164 IPR017930 -
Lele02g1130 442 ProSiteProfiles Myb-like domain profile. 110 160 IPR001005 -
Lele02g1130 442 SUPERFAMILY Homeodomain-like 109 162 IPR009057 -
Lele02g1130 442 Gene3D - 117 163 - -
Lele02g1130 442 FunFam protein REVEILLE 6 isoform X1 117 165 - -
Lele02g1130 442 MobiDBLite consensus disorder prediction 207 232 - -
Lele02g1130 442 ProSiteProfiles SANT domain profile. 113 164 IPR017884 -
Lele02g1130 442 Pfam Myb-like DNA-binding domain 115 160 IPR001005 -
Lele02g1130 442 MobiDBLite consensus disorder prediction 180 202 - -
Lele02g1130 442 SMART sant 114 162 IPR001005 -
Lele02g1130 442 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 113 162 IPR006447 GO:0003677
Lele02g1130 442 PANTHER SWI/SNF COMPLEX-RELATED 102 323 - -
Lele02g1130 442 CDD SANT 117 160 IPR001005 -
Lele02g1130 442 MobiDBLite consensus disorder prediction 244 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1130 Lele-ChrLele02 7238637 7241279 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele02g1130 Myb_DNA-binding 5.5e-15 CL0123