Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1083 ATGCTCACCGATCACGACGCCACTGATTCTGACTCTGACTCTTCCTCCTCCCGTGAAACCCCACAAAGATCATCAAGAGTCAAGCGCCACGTAACACAGATCACCCTCCATCTTCCTTCGTCCTCCAATTCTCCTTCTTCCCCCTCTTCTCCCCGCACTCCTGCCAGGTCCAACCCGACCCTCTTCAGGCGGCCCGCTAGTGCCTCAGCCTCTCGCCGCCACAAAAAGTTTAGAGGCGTTCGCCAGAGACCTTGGGGTCGCTGGGCCGCCGAGATCCGGGATCCGAACAGAAGAAAACGGGTCTGGCTTGGAACCTTTGACACGGCGGAGGAGGCCGCTTCTGAGTACGACAGGGCAGCACTGAAGCTCAAGGGTCCTAGCGCGGTCACCAACTTCCCTAACTCCATCATTACGGAGTATACACCGACGCCGATCGCTGTCGCGGTTGAAAGTCCCAGCACTGAAGGAACGGTCTCGTACTCCGATTCGGTGGCGTCACCCACTTCTGTTCTCCCATGCGACGGCGATTCGACGGCGTTCGACGATTTCCGTTACGGGGCTGTGGATGCGTTCGGGTTCGACATAGATGTGCCGCTGAGTTTGGCGGACGAGAATTTGATGTTGTCGAATCAACCGTTTGGTAAAGAGGAGTTCGGCGAGTTTGACTTCGATGACTTCTTGACCGTGAAGTGA 693 0.5671 MLTDHDATDSDSDSSSSRETPQRSSRVKRHVTQITLHLPSSSNSPSSPSSPRTPARSNPTLFRRPASASASRRHKKFRGVRQRPWGRWAAEIRDPNRRKRVWLGTFDTAEEAASEYDRAALKLKGPSAVTNFPNSIITEYTPTPIAVAVESPSTEGTVSYSDSVASPTSVLPCDGDSTAFDDFRYGAVDAFGFDIDVPLSLADENLMLSNQPFGKEEFGEFDFDDFLTVK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1083 230 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Lele02g1083 230 Pfam AP2 domain 76 125 IPR001471 GO:0003700|GO:0006355
Lele02g1083 230 Gene3D AP2/ERF domain 75 135 IPR036955 GO:0003700|GO:0006355
Lele02g1083 230 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Lele02g1083 230 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Lele02g1083 230 SMART rav1_2 76 139 IPR001471 GO:0003700|GO:0006355
Lele02g1083 230 PIRSF PTI6 1 230 IPR017392 GO:0003700
Lele02g1083 230 MobiDBLite consensus disorder prediction 1 81 - -
Lele02g1083 230 MobiDBLite consensus disorder prediction 14 65 - -
Lele02g1083 230 CDD AP2 75 135 IPR001471 GO:0003700|GO:0006355
Lele02g1083 230 ProSiteProfiles AP2/ERF domain profile. 76 133 IPR001471 GO:0003700|GO:0006355
Lele02g1083 230 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 170 - -
Lele02g1083 230 FunFam Ethylene-responsive transcription factor 2 75 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1083 Lele-ChrLele02 6819795 6820607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1083 2 171 AP2-EREBP Transcription Factor Family AT4G27950 46.591 2.14e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele02g1083 AP2 1.5e-16 CL0081