Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1076 ATGAATTTCGTATTTGAGGGGTTTGGTTCTATAGATTTGCGTGGGGAGTGGTTGGTTTTCAAATTTATGTGGTCCGAGGTTTGTGTCGGTGTTTCTGGTGGATCCGCCACTGCTCATGAATGGACGAAGGGCTGGCCTCTTCCATATGGTGGATTCGCCCAATTTTGTAAAAACTGCGGGTCTGCATATGAGGCATCCATTTTCTGTAGTAAATTCTACCGCAAAGAAACTGGTTGGAGGGATTGCGGCTTTTGCAACAAGCCTATCCACAGTGGATGCATAGTATCTCGGTCTTTGTTCGATTACCTTGACTTTGGAGGTATAGGTTGCATCAGCTGTATAAAGGCTTCTCGATCTCGTTTGGCTTCTATTATTCATTCATTTATGCATATGCAGAACAACAAAGAACCTAATGGGGCTGGTACATCTACCACAGCAAATGCAAGAAACTCTGCCCTTGCTTCTGCTGGAGAGGTTGTACAAGATAGGTTTGAGGGCAAACCATCTGCTCTGTTTCGTCAAGTGCAAAGATCTCACCCTGTATTTGCTAAACCATCAAAGACTGGTCTTACCATGAACATAGAAACAAATAAAGGAATGAATTCTATTTCTCAGGCACGGGTTGCCCGGCCACCTGTTGAAGGAAGGGGCAAGAGTCAGCTACTTCCTCGGTACTGGCCTAGGATTACTGATGAAGAGCTGAAGCAACTGTCTGGAAAGTATCCTTTTGATTTTTTTTTTTTTTTTGCAGCTTTTGCACTTCTGCAGAGTTCTGTGCCATTGTTTGAGAAGGTGCTGAGTGCCAGTGATGCAGGTCGAATTGGGCGCCTTGTTCTTCCAAAGGCTTGTGCTGAAGCTTTTTTCCCTCCTATTTCTCAATCAGAAGGTCTTCCTTTGGAAATGCGAGATGTGAAGGGGAATGAATGGACTTTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTGACGCCTTGCATACAGTCAATGGAATTGATTGCGGGTGATACTGGACAAACGGAAGAATTATGCCCGTATGATGCGTCTACATCTGCACATTCTAATGGGATTACAACAAAGGAAACAACTATTTCTGGTGCAACTGCGAACCTACCCTCAGGAAGCAGTTATTCTGATGTTCTTCAGTCTGTGGAAGGGAACATGGAATCTCACTTAAATAGACAATCAGAACACCTGCATTTGGGTAGGAGGGTAGCTGATTTTCCTCAAATGGAAAATTATGGCCAGATGGCAAAAAATGATTCACTGCAGCAACCAATTTTAGTTTCAGAGAAGAAAAGGACTCGGAATATTGGGACTAAAAGTAAGAGGTTCCTCATTAATTGTGAAGATGCTTTGGAGTTGAGACTAACGTGGGAGGAAGCACAAGATTTACTCCGTCCACCACCCAGTGTTCAGCCAATCATTGTTACAATTGAGGACCACATGTTTGAGGAGTACAATGTATGTGTCACTGTCAAATTAATATATGCTTTTAATTAG 1521 0.43 MNFVFEGFGSIDLRGEWLVFKFMWSEVCVGVSGGSATAHEWTKGWPLPYGGFAQFCKNCGSAYEASIFCSKFYRKETGWRDCGFCNKPIHSGCIVSRSLFDYLDFGGIGCISCIKASRSRLASIIHSFMHMQNNKEPNGAGTSTTANARNSALASAGEVVQDRFEGKPSALFRQVQRSHPVFAKPSKTGLTMNIETNKGMNSISQARVARPPVEGRGKSQLLPRYWPRITDEELKQLSGKYPFDFFFFFAAFALLQSSVPLFEKVLSASDAGRIGRLVLPKACAEAFFPPISQSEGLPLEMRDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMELIAGDTGQTEELCPYDASTSAHSNGITTKETTISGATANLPSGSSYSDVLQSVEGNMESHLNRQSEHLHLGRRVADFPQMENYGQMAKNDSLQQPILVSEKKRTRNIGTKSKRFLINCEDALELRLTWEEAQDLLRPPPSVQPIIVTIEDHMFEEYNVCVTVKLIYAFN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1076 506 Pfam B3 DNA binding domain 262 343 IPR003340 GO:0003677
Lele02g1076 506 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 142 494 - -
Lele02g1076 506 SUPERFAMILY DNA-binding pseudobarrel domain 256 343 IPR015300 -
Lele02g1076 506 SMART B3_2 262 355 IPR003340 GO:0003677
Lele02g1076 506 Gene3D - 227 354 IPR015300 -
Lele02g1076 506 CDD B3_DNA 260 343 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1076 Lele-ChrLele02 6756551 6761479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1076 26 494 B3 DNA Binding Superfamily AT4G32010 41.905 1.05e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele02g1076 B3 9.9e-11 CL0405