Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1049 ATGGCGCACCACGCATTTTCTTCTTCTTCTTCTTCTTCTGCAATAATGCTTCTCATTGTTGTCTCCATCAGCATTCTCCTCCAAGACTTCACCGCCACCGGTTATGGAGATTGGCAGGGCGCTCATGCCACCTTCTACGGCGGTGGTGATGCCACCGGCACAATGGGAGGGGCATGTGGGTATGGGAATTTGTACAGTCAGGGGTACGGAACCAACACGGCGGCCCTGAGCACAGCTCTGTTCAACAATGGCTTAAGCTGTGGGGCTTGTTATGAGCTAACATGTAGCAGTGACCCAAGATGGTGCAAGCCTGGCTCCATCATTGTCACTGCCACAAACTTTTGCCCTCCAAACTTAGCTTTGCCCAACAACAATGGTGGTTGGTGCAACCCTCCACTTCAACACTTCGATATGGCTGAACCTGCCTTCCTCCAAATTGCTCAGTACAGAGCAGGGATCGTCCCTGTCTCCTTCAGAAGAGTGCGGTGTATGAAGAAGGGAGGAGTCAGGTTCACGGTCAATGGTCACTCATATTTCAACTTGGTTTTAATCACCAACGTGGGAGGTGCAGGGGATGTTCATGCGGTGTCAATCAAAGGGTCGAGAACAGGGTGGCAATCAATGTCCAGGAACTGGGGCCAGAACTGGCAGAGCAACTCATACCTGAACGGTCAAGCTCTGTCTTTCCAAGTCACCACCAGTGATGGTAGGACCTTGACAAGCTACAACGTGGCACCTCCTAATTGGCAGTTCGGCCAGACCTTCCAAGGTGTGATAGAAGGATTTGATTCTGGGGAATCTATTTTTCTGATAGCTGAGCTTTGCTTTTGCATTCCCGTTACGGGCATCATGGCTGATCTTCAAGTTAGTTCGCCGCAAATGACCGGAGGCTCAGTGGCGGAGGATCGCCTGTGCTCGTCCCCACCATCGTCACCGCTTCCGCCGTCAAGCCCGGATCCTTCGTCGGTTGGGGCGGAAGCTTGGTCGAGAGCCGAGAAAACGACTCGTGACATATTGTGCAGGATACAGCCCACTTTGGGCGCCGACCAGAGAAGGAAGGAGGTCGTTGGTTATGTACAGCGATTGATTAAATTTGGTCTTGGATGCGAGGTCTTCCCATATGGATCAGTTCCATTAAAAACATATCTTCCTGATGGCGATATTGATTTGACTGCACTTAGTGGTCAAAATATTGAGGATGCATTAGTATCTGATATTCATGCTGTCCTCAGGGGGCAGGAAATCAATGAAGCTGCTGAATATGAAGTAAAGGATGTTCGTTTCATTGATGCCGAGGTTAAGCTCGTCAAATGCATCGTACAGAATATTGTGGTAGATATTTCTTTCAATCAGTTGGGAGGACTCTGTACGTTATGTTTTATTGAAAAGGTTGATCGTCTTGTTGGAAAGGATCATCTTTTCAAGCGTAGTATTATCTTGATAAAAGCTTGGTGCTACTATGAGAGTCGTATCCTTGGTGCCCACCATGGTCTGATCTCAACATATGCTTTGGAAGCGCTAATTCTTTACATTTTCCATCAATTTCATTTATCCTTAGATGGTCCACTAGCGGTTCTATATAGATTTTTGGATTACTTCAGCAAATTTGATTGGGACAATTATTGCGTTAGTTTGAGGGGTCCAGTTAGAAAGTCTTCACTGCCGGATATAGTAGCTGAAGCGCCAGAAAATGGGAGTTCTCTACTTCTAACAGAAGAATTTATCAGAGATTGTGTGGAATCGTTTTCAGTTCCTTCAAGGGGGCCTGAGCAAAACATGCGTGCATTTCCCCAGAAACACCTTAACATCATTGATCCATTAAAGGAAAACAACAACCTTGGGCGCAGTGTTAATAGAGGTAATTTTTATAGAATACGCAGTGCCTTTAAGTATGGAGCTCGTAAACTTGGCTGGATTCTTACGTTACCTAAGGATAAAATAGAAGATGAACTGAATAAGTTCTTTGCGAACACTTTGGATAGGCATGGAAACACACAGTGGGATGACATCCTATTACCTAGTCTGGCTTATGGTGCGAGAGCTTTTGAATTTTCATCCTCCTCTGACTCCAGATCTTTCTCAGAGGACATGGCTCTTCTTAGTTTGTCAGGTGGACTTAACAAAGATACTGTGATGGGAGGTCCACATGACTCTGAAGTCAGAGATGAAAGAGAGCGAAATCTAGCAAAAGATATCTCTGCCCATGCAGGGCCATCATACGACTCCAGTCAAGATAAAAATGAAGTTGCAGGGTATTTTCCTGGTGAAGATGTTAAGAATGTTGTGACTTCTGGAGTCTTGGGTATGGTGAGCAATGGTTCATCATATTCAAATGTGAGGACTCTCTTAAGTAATTCAGTGTCAGGAAAACATTTAACACATTCTAATCTTGGCTTGCTAAGGGAAAATGGAAATGTTGAAAATGGGATTTCTTGTACCGAATCAGCCGTGAATTCTGTTCTTGATGATGACAAAGCGAAGCATATTATGGTGAGCAGTTCAATCTGTTCTACTAACAATGAGAACGACATGCCATCTTATGATTCAGCAGTTTTGAATAATGCTGCTGATAACTTAGACAATGTTTCTTCTTCTTATGGTGATAGATGCACTGCAAGTGTTTCTGGAGACTCTGAAGCTTCGAAAGTTTTGTTGGACCTGACTGGAGATTATGACAGTAACATTAGGAACCTACAATATGGTCAGATTTGTCATGGTTTTGCTGTCTGTCCACTTGTGGTACCTAGTCCCCCCATGTCTCCTAAGTTGCAGAATAGGCATCCATGGGAAACTGTTCGTCAGGGTTTTCATATTAATCACAACATTCTTTCTCAGACAAACTCTAACAGTATTGTTGTGGGACAACAACTATATGTTGTTAATCAACCTACTCTACCCATTGCCTCATTTGGTCCGGAAGAGAAGAGAAAACCACGAGGAACAGGAGCATACTTCCCCAATATGGTATCTGCTTCCCCCCAATACAAGGATAGGGCAACCCCTGGAAGGGGAAGGGGGCATGTTCCTTGGACTCATGGACAATTGCAGAGGCACACACGTAAATATGGTATGGATGCAGCTCTGCAAGAGGTGTGTGTGTCTGTTGATGGCATCTTCGAACCTGCATTTGAAGGGTATCCAGTTATTGGCAATATTAGACCCAGGTTGTCAGAAACATATTTCTCTCAACCTTCCCCACAGGGATCTCAATTTGCTAATGGTTTCCTTCATCCATCTGAGAAACATGAGGCTGACACTGTGAGCCCTCAGCTGCGTGGATCACCGAGAACTGAAGTAAGCAGTCATCCAGAATCTGGCATTTCTAATTCTGGAGGCTCTGTGCCTAGCTCGGGTGTCTTGGCAGAGAGTTCTAATTCAATATCTCGAGCTGATCACAAAAGGATTGAAGTGCAAGCCTATCATTTGAAGAATGAAGATGACTTCCCTCCACTTTCTCACTGA 3462 0.4497 MAHHAFSSSSSSSAIMLLIVVSISILLQDFTATGYGDWQGAHATFYGGGDATGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYELTCSSDPRWCKPGSIIVTATNFCPPNLALPNNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVSFRRVRCMKKGGVRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTLTSYNVAPPNWQFGQTFQGVIEGFDSGESIFLIAELCFCIPVTGIMADLQVSSPQMTGGSVAEDRLCSSPPSSPLPPSSPDPSSVGAEAWSRAEKTTRDILCRIQPTLGADQRRKEVVGYVQRLIKFGLGCEVFPYGSVPLKTYLPDGDIDLTALSGQNIEDALVSDIHAVLRGQEINEAAEYEVKDVRFIDAEVKLVKCIVQNIVVDISFNQLGGLCTLCFIEKVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGLISTYALEALILYIFHQFHLSLDGPLAVLYRFLDYFSKFDWDNYCVSLRGPVRKSSLPDIVAEAPENGSSLLLTEEFIRDCVESFSVPSRGPEQNMRAFPQKHLNIIDPLKENNNLGRSVNRGNFYRIRSAFKYGARKLGWILTLPKDKIEDELNKFFANTLDRHGNTQWDDILLPSLAYGARAFEFSSSSDSRSFSEDMALLSLSGGLNKDTVMGGPHDSEVRDERERNLAKDISAHAGPSYDSSQDKNEVAGYFPGEDVKNVVTSGVLGMVSNGSSYSNVRTLLSNSVSGKHLTHSNLGLLRENGNVENGISCTESAVNSVLDDDKAKHIMVSSSICSTNNENDMPSYDSAVLNNAADNLDNVSSSYGDRCTASVSGDSEASKVLLDLTGDYDSNIRNLQYGQICHGFAVCPLVVPSPPMSPKLQNRHPWETVRQGFHINHNILSQTNSNSIVVGQQLYVVNQPTLPIASFGPEEKRKPRGTGAYFPNMVSASPQYKDRATPGRGRGHVPWTHGQLQRHTRKYGMDAALQEVCVSVDGIFEPAFEGYPVIGNIRPRLSETYFSQPSPQGSQFANGFLHPSEKHEADTVSPQLRGSPRTEVSSHPESGISNSGGSVPSSGVLAESSNSISRADHKRIEVQAYHLKNEDDFPPLSH 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1049 1153 FunFam Expansin 29 164 - -
Lele02g1049 1153 Gene3D - 26 163 IPR036908 -
Lele02g1049 1153 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 178 257 IPR007117 -
Lele02g1049 1153 Pfam Lytic transglycolase 73 157 IPR009009 -
Lele02g1049 1153 PRINTS Expansin/Lol pI family signature 243 257 IPR007118 GO:0005576
Lele02g1049 1153 PRINTS Expansin/Lol pI family signature 151 167 IPR007118 GO:0005576
Lele02g1049 1153 PRINTS Expansin/Lol pI family signature 55 73 IPR007118 GO:0005576
Lele02g1049 1153 PRINTS Expansin/Lol pI family signature 205 219 IPR007118 GO:0005576
Lele02g1049 1153 PRINTS Expansin/Lol pI family signature 37 52 IPR007118 GO:0005576
Lele02g1049 1153 PRINTS Expansin/Lol pI family signature 77 95 IPR007118 GO:0005576
Lele02g1049 1153 FunFam Expansin 168 260 - -
Lele02g1049 1153 SUPERFAMILY Barwin-like endoglucanases 37 186 IPR036908 -
Lele02g1049 1153 MobiDBLite consensus disorder prediction 1090 1126 - -
Lele02g1049 1153 SUPERFAMILY PAP/OAS1 substrate-binding domain 473 640 - -
Lele02g1049 1153 Gene3D Beta Polymerase, domain 2 344 452 IPR043519 -
Lele02g1049 1153 MobiDBLite consensus disorder prediction 1082 1132 - -
Lele02g1049 1153 PRINTS Expansin signature 167 179 IPR002963 GO:0009664
Lele02g1049 1153 PRINTS Expansin signature 95 106 IPR002963 GO:0009664
Lele02g1049 1153 PRINTS Expansin signature 243 259 IPR002963 GO:0009664
Lele02g1049 1153 PRINTS Expansin signature 107 117 IPR002963 GO:0009664
Lele02g1049 1153 PRINTS Expansin signature 179 200 IPR002963 GO:0009664
Lele02g1049 1153 PRINTS Expansin signature 68 82 IPR002963 GO:0009664
Lele02g1049 1153 PRINTS Expansin signature 214 235 IPR002963 GO:0009664
Lele02g1049 1153 PRINTS Expansin signature 143 156 IPR002963 GO:0009664
Lele02g1049 1153 PRINTS Expansin signature 126 143 IPR002963 GO:0009664
Lele02g1049 1153 SUPERFAMILY PHL pollen allergen 165 257 IPR036749 -
Lele02g1049 1153 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 56 168 IPR007112 -
Lele02g1049 1153 Gene3D - 453 656 - -
Lele02g1049 1153 Gene3D - 168 260 IPR036749 -
Lele02g1049 1153 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 302 1153 - -
Lele02g1049 1153 Pfam Expansin C-terminal domain 169 246 IPR007117 -
Lele02g1049 1153 SUPERFAMILY Nucleotidyltransferase 316 492 IPR043519 -
Lele02g1049 1153 SMART dpbb_1 73 158 IPR007112 -
Lele02g1049 1153 MobiDBLite consensus disorder prediction 294 328 - -
Lele02g1049 1153 CDD NT_PAP_TUTase 351 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1049 Lele-ChrLele02 6466975 6476636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1049 13 257 Expansin Gene Family AT2G40610 78.455 1.06e-134 407