Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1046 ATGTATGGCAGTAAAGAGCATAAGGATAATATTAAAGGAGACCACGGTTATGTGGAAACCGACCCGAGTGGTCGCTATGGCAGGTTTGAAGACATTCTTGGAAAAGGAGCAATGAAGACAGTATACAAAGCTATTGATGAGGTCCTTGGAATGGAGGTAGCTTGGAACCAGGTCAGACTCAATGAGGCACTTCGCACACCAGATGATTTGCAGCGGCTTTACTCAGAGGTTCATCTTCTCAGTACCCTCAAGCACCAATGCATCATAAGATTCTACACCTCCTGGATCGATGTTGATAAAAAGACCTTCAACTTCATCACAGAAATGCTCACTTCAGGGACACTGAGAGAATACAGGAAGAAATATATGCAAGTTGGCATACAGGCGATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTACCTACATGACCATGATCCTCCGGTAATTCATAGGGACCTCAAATGTGATAACGTATTTGTCAACGGCCATCTTGGACAAGTGAAAATCGGCGATTTAGGACTAGCAGCTATTCTCCGTGGTTCCCAGTCTGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCTCCAGAATTATATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCGTTTGGCATGTGTGTTTTAGAAATGCTTACATCTGAATATCCATATGGTGAATGTGCTAATCCTGCACAGATCTACAAAAAAGTAACATCGGGAAAGCTGCCTGCAGCACTTTTTCGGATTGAAGAAGCAGAAGCACAGAAGTTTGTTAGAAAATGCTTGGCAGCTGCAGCAGAAAGACCATCAGCTAAAGAATTATTGCTTGATCCTTTTCTTTCATCTAATGACGCGTTATTAGATACAAAGTTTGATATTCAAAAGCCACTGTTGAATGACATTGAGATAGAAAAGTCGCATTTGACCGATGGTTCACACAGGACTGGGATGAAAATCACTGGGAAGCTGAATCCGGAGGACGATACAATATTTCTCAAAGTGCAAATCACTGATAAAAATGGTTCTGCAAGGAACATTTATTTTCCCTTTGACATTTTAACGGATACTCCCATTGATGTTGCGATGGAGATGGTGAAAGAGTTGGAGATCACTGATTGGGAGCCAATTGAAATTTCTAGTATGATTGAAGCAGAGATATCTACTCTGCTGCCACAGGGGAGGAAGAGGGACTGTTTGGATACTTTTCATATGTTCAATTATCAGAATGATGACAATGATGAACCTCAATATCGTTTTAGCTCATTATCATCACAAGAATCAGTATCAGCCATAGTTTCAAAAGCTGAGGAACTACCCAATGGATATTACTGGCTCAATGATGACTTGATTGATGATTCCAGTTCCCGATGCTCTTCACAGGGGACATATTCTAACTTGAATTATGTTTCTGCGGATGACCAGGAGTACAATGTGACTCATACAAGAAAAGATAAACAACCGATCACTAAGAGTCACAAATGTAAAATGTTTTCCCCTGGTGAAGAACTAAGCATTTGGTTGTCTCCGTTTGGAACGAGTTGCAACTACTGTAAAGTTTTAGTGGGACCACATGCTGCCGCATCTACTAGTAAAAACAAGAAGATAGACAATCGTAGCTTGACAAGGAACAATTCATTTATTGATGTACATAGCCAAATGCTACACCGTTCCCTAGTTGAGGAGGTAAGCAAGAGACGCTTATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTCAGAATCCTCTTGAGGCTCCCAGGAAAAAATCACAACCACTGTTTGGTGCTTTAGATGTGAAATCTTCAAGGAACGGAAAAGGACAAGGACTTGGGAGTTATTCTTGGAACTTCAGAAGTGAAAGAGATAGATAG 1887 0.4102 MYGSKEHKDNIKGDHGYVETDPSGRYGRFEDILGKGAMKTVYKAIDEVLGMEVAWNQVRLNEALRTPDDLQRLYSEVHLLSTLKHQCIIRFYTSWIDVDKKTFNFITEMLTSGTLREYRKKYMQVGIQAIKNWARQILQGLVYLHDHDPPVIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYGECANPAQIYKKVTSGKLPAALFRIEEAEAQKFVRKCLAAAAERPSAKELLLDPFLSSNDALLDTKFDIQKPLLNDIEIEKSHLTDGSHRTGMKITGKLNPEDDTIFLKVQITDKNGSARNIYFPFDILTDTPIDVAMEMVKELEITDWEPIEISSMIEAEISTLLPQGRKRDCLDTFHMFNYQNDDNDEPQYRFSSLSSQESVSAIVSKAEELPNGYYWLNDDLIDDSSSRCSSQGTYSNLNYVSADDQEYNVTHTRKDKQPITKSHKCKMFSPGEELSIWLSPFGTSCNYCKVLVGPHAAASTSKNKKIDNRSLTRNNSFIDVHSQMLHRSLVEEVSKRRLFKTVGAVENIGFQNPLEAPRKKSQPLFGALDVKSSRNGKGQGLGSYSWNFRSERDR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1046 628 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1046 628 SUPERFAMILY Protein kinase-like (PK-like) 29 307 IPR011009 -
Lele02g1046 628 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 485 - -
Lele02g1046 628 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1046 628 CDD STKc_WNK 25 285 - -
Lele02g1046 628 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Lele02g1046 628 MobiDBLite consensus disorder prediction 603 628 - -
Lele02g1046 628 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Lele02g1046 628 Gene3D - 321 403 - -
Lele02g1046 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lele02g1046 628 Gene3D Transferase(Phosphotransferase) domain 1 109 292 - -
Lele02g1046 628 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1046 628 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1046 Lele-ChrLele02 6454772 6458618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1046 17 593 MAP Kinase Kinase Kinase AT5G58350 55.938 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele02g1046 Pkinase 6.8e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1046 02 6454772 6458618 Lele02g1046 02 6454772 6458618 ECH
Lele02g1046 02 6454772 6458618 Lele03g1036 03 6001707 6005355 hybridization
Lele02g1046 02 6454772 6458618 Lele04g1036 04 6416962 6420838 hybridization