Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1045 ATGGGTAATCACAGGTTCAAATTGTCAGATATGATACCAAATGCTTGGTTTTACAAACTTAGAGACATGAGCAGATCAAGGAAGCAGAACGGTTCTCATGCTGTGAAGAACAAAGCAAGCTCACCAGTAATGTCCCAGAGGTCGCCCCAAAAGTGTTTACATTATTTCCCCACAGAACCTTACAAAGCTGGTATGCTTTTCAACTCACCAGTTCACACCAAAGTCACAGACTTTTCATTCAATGTTTCTCCAAGAAGGTCATCCAAGAGAAGAGCTCAGAGGAAAACTATTTACAAGCCATCTCCTTCAGTTGTGTCCTCTGTCTCAACCGCTTACAACTGCCATTGGACTCATCAGCCAAATAAAGCCGAGTCTCCGGATTTCTATGCTTCTTCCATTGAGAGTTCTTCCTCTGAGTTAGATCTCTATGAATGGATTACATCTGAGTCTGATGCGTGTGATAGCTTAGCAGCTCCTCACATGGTCAATGGATTATCCCCTGATTGCAGTTGCAGGGTTAGTTCTTCCACTAATGATATCATCATAGACATGAACAATGAATCATTTGCTGTGAATACTGAAAAGCTTGATGGTTTTGATGCAATTTCGAAATTAGGCCTTCCTCCTATAGTGACAAAACCAGCGAGGTTTGATGATCAGGTCATTGAAGCACATTACTTGAAATGTTCATCTAAGGTGGAGGAAAGCAGCAGAACTACGACTCCAAAGTCCTCTGGTAATTCAAGAGGAATAAGACTTAGAGTCAATTGTGCAAAACTTGCAAGTAGGAAAGTTCAAGCCTGTGCAAGGAGTGTATCATCATCATCATCATCCAGTGCATGCAAGGTTTCAAGGAACACAACGGGATTTCCAGAAGGTTTTGCAGTTGTCAAGTCCTCAATTGATCCACAAAGAGATTTCAAGGAGTCAATGGTGGAGATGATCAGGGAGAACAGTATATGGTCATCAGAGGATTTTGAGGATCTTCTAGCTTGTTATCTCTCACTTAACTCAAGAGCATACCATGAATTCATAATCAGAGCATTTGAGCAAACTTGGTTTGACTTAGCTCAACTCAGAATGTAA 1086 0.4125 MGNHRFKLSDMIPNAWFYKLRDMSRSRKQNGSHAVKNKASSPVMSQRSPQKCLHYFPTEPYKAGMLFNSPVHTKVTDFSFNVSPRRSSKRRAQRKTIYKPSPSVVSSVSTAYNCHWTHQPNKAESPDFYASSIESSSSELDLYEWITSESDACDSLAAPHMVNGLSPDCSCRVSSSTNDIIIDMNNESFAVNTEKLDGFDAISKLGLPPIVTKPARFDDQVIEAHYLKCSSKVEESSRTTTPKSSGNSRGIRLRVNCAKLASRKVQACARSVSSSSSSSACKVSRNTTGFPEGFAVVKSSIDPQRDFKESMVEMIRENSIWSSEDFEDLLACYLSLNSRAYHEFIIRAFEQTWFDLAQLRM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1045 361 MobiDBLite consensus disorder prediction 27 46 - -
Lele02g1045 361 ProSiteProfiles OVATE domain profile. 296 355 IPR006458 -
Lele02g1045 361 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 109 357 IPR038933 GO:0045892
Lele02g1045 361 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Lele02g1045 361 Pfam Transcriptional repressor, ovate 300 356 IPR006458 -
Lele02g1045 361 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 294 357 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1045 Lele-ChrLele02 6447311 6448396 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele02g1045 Ovate 5.3e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1045 02 6447311 6448396 Lele02g1045 02 6447311 6448396 ECH
Lele02g1045 02 6447311 6448396 Lele03g1035 03 5995593 5997286 hybridization
Lele02g1045 02 6447311 6448396 Lele04g1035 04 6414335 6415426 hybridization