Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1044 ATGCCAGAGATCGAACCCGTGCCGGCGAACAACAACGCCTTGTTCGGCAAATATGAGTTTGGAAGGCTTTTGGGTTGTGGAGCCTTCGCGAAGGTCTACTTTGCCCGCAATGTCCAGAACGGCCAGAGCGTCGCCATTAAGGTCATCAACAAGAAGAAGATATGCGGCACCGGGCTCATGTCTAATATCAAGCGTGAAATTACCATCACGAGTCGCCTCCATCACCCCAATATTGTCAAGCTCCACGAGGTCTTAGCCACCAAGACAAAGATCTACTTCGTCATGGAGTTGGTCAAGGGAGGGGAATTGTTTGCCAAGATCTCCAAGGGACGCTTCAGCGAGGACCTCAGCCGGAAGTATTTACAGCAGTTGATATCAGCCGTCGGGTACTGCCACTCCCGCGGTGTGTACCACCGTGACTTGAAACCCGAGAATCTCTTGCTCGACGAGAATGGGAACCTGAAGGTTTCGGATTTCGGACTCAGTGCCGTAAAAGATCAGATTCGAACCGATGGGTTGCTCCACACTCTTTGTGGCACTCCGGCTTACGTCGCACCGGAGGTTTTGGCCAAGAAAGGCTACGATGGAGCGAAGGTGGATGTGTGGTCCTGTGGCGTTATCCTCTTCGTATTGACAGCCGGATACCTACCGTTCAACGACCCGAACCTCATTAACATGTACAAGAAGATATACAGAGGCGAATATCGGTGTCCCCGGTGGATGTCGCCCGACCTCCGGCGTTTTCTATCGCGGCTTCTGGACACCAACCCGGATACAAGAATCACCATCGACGAGATCCTCCGGGACCCGTGGTTCAAGAAAGGGTACAAGGAGGTTAAATTTCACGAGGAACACGTCGGGTCTTCATCAGGGACGAAGCCAGATGAGGCGGATCAGAAGATGACCGATCTGAACGCATTCAGTATCATCTCGTTCTCCTCCGGTTTGAATCTGTCAGGTTTGTTTGATGACCCACACGACAAAACTGAGGGAACCGAGCGGTTCGTGTTAGAAGCATCACAGGAGAAGCTGATGGAGAGTGTGAAGGAGATCGCCAAGGTGGAGAAACTCGGGGTGAGAAGGAGGAAGGAGTGCGGGGTGGAGCTGGAGGGGCAGAAAGGTAATTTCGAGATTACTGTTGTTTTTTACCGTTTAATGGAAAGCCTGGTATTAGTGGAGGCGCAAGGAAGGGGCAGAGAAGGTGTGGACTTGTGGAAGGACAAGCTTAAGCCTCAGCTCTGTGCTGCCACAGGTCAAGAAACAGATTCCCAGGTTGCCTGTAACTAA 1287 0.5198 MPEIEPVPANNNALFGKYEFGRLLGCGAFAKVYFARNVQNGQSVAIKVINKKKICGTGLMSNIKREITITSRLHHPNIVKLHEVLATKTKIYFVMELVKGGELFAKISKGRFSEDLSRKYLQQLISAVGYCHSRGVYHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEVLAKKGYDGAKVDVWSCGVILFVLTAGYLPFNDPNLINMYKKIYRGEYRCPRWMSPDLRRFLSRLLDTNPDTRITIDEILRDPWFKKGYKEVKFHEEHVGSSSGTKPDEADQKMTDLNAFSIISFSSGLNLSGLFDDPHDKTEGTERFVLEASQEKLMESVKEIAKVEKLGVRRRKECGVELEGQKGNFEITVVFYRLMESLVLVEAQGRGREGVDLWKDKLKPQLCAATGQETDSQVACN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1044 428 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1044 428 SUPERFAMILY Protein kinase-like (PK-like) 15 303 IPR011009 -
Lele02g1044 428 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1044 428 Pfam NAF domain 303 360 IPR004041 GO:0007165
Lele02g1044 428 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Lele02g1044 428 FunFam Non-specific serine/threonine protein kinase 8 305 - -
Lele02g1044 428 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Lele02g1044 428 Gene3D Transferase(Phosphotransferase) domain 1 98 279 - -
Lele02g1044 428 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1044 428 Gene3D Kinase associated domain 1, KA1 300 416 - -
Lele02g1044 428 Coils Coil 337 357 - -
Lele02g1044 428 CDD CIPK_C 305 414 - -
Lele02g1044 428 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
Lele02g1044 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele02g1044 428 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 395 - -
Lele02g1044 428 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1044 Lele-ChrLele02 6427566 6428852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1044 1 426 CBL-interacting serine-threonine protein kinases AT2G30360 63.158 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele02g1044 Pkinase 1.5e-71 CL0016